Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2685 ATGGAGATGGAGCAACTCCTTAGTATGGGGTTCCCGGATGAGTTAGCCGCTCAAGCTTTGGCTGCCACCGGCGGCAAATCCACCGTGAAAGCCACCGAATGGATTCTGACTCACAAATCCAACTCTAACTCTAATCCTTCTTCTTCCGCTTCCACATTCCAACCCAAGCTCGATCATTTCTTCAATTCCCCTCCACAATCACAACCACAAGAAGAAGACGAACCTTCGAAACGCCTCAGACATTCTCCTTCTTTCTTCTTCAAGACCCCTAACACTGACAAGAAACACATTCACGAACCCTTGTACGAGCGTTTGCGTCCCAGAACCCTGGACGACGTGGTTGGTCAGGAGCATCTCCTCGCCCCCAACTCCCTTCTTCGCTCCGCAGTCCAACGCAATCGCCTCCCCTCCATCCTCCTCTGGGGCCCACCCGGCACTGGTAAGACCACCATCGCCAGAGCCATCGTTAACTCCACTCCATCTTCCAACTCCTCCTACCGCTTTGTCTCCCTATCCGCCGTCACTAGCGGCGTTAAAGACGTGAGGGACGCCGTGGATGAGGCCAGAAAAGTGAGAGTCAAAACCAAGCAAAGCACGGTTCTGTTCGTGGACGAGGTTCACAGGTTCAACAAGTCCCAACAGGATTCTTTCTTACCCGTCATTGAAGATGGCAGCATTGTCTTCATTGGGGCCACCACCGAGAACCCTTCTTTCCATTTGATCACGCCTCTCCTCTCTCGCTGCCGTCTCCTCACCCTTAACCCTCTCCAGCCCCATCACCTTGCCTTGCTTCTCAACCGTGCTGTCACTAACACTGACAAGGGCTTGATGCAGACCGTGGGGGTTCAAGTTCATGTCAGCGAGGATGTCGTTGATTTCATAAGCAACAACTGTGATGGGGATGCGAGGGTGGCCTTGAATGCATTGGAGATTGCAGCTGTTACCGCAGCAGCACAAGGGATGATGAATGTTAGTGTTAGTGTTGATGATGCAAAAGAGGCACTTCAGTGCAAGCATGTTGCTTATGACAAAGCTGGGGAAGAGCACTACAATGTAATCAGTGCGCTGCACAAGTCTATGAGGGGAAGCGATGCGGATGCAGCTATTTATTGGTTGGCTAGAATGTTAGAGGGAGGTGAGCAGCCTCTTTACATTGCACGCAGACTCGTACGGTTTGCAAGTGAGGATGTTGGTTTGGCTGATCCATCAGCTCTTAATCAGGCTGTATCTTGCTACCAAGCTTGCCACTTCATAGGAATGCCCGAATGCAATGTCATTCTTGCTCAGTGTGTTGCTTACTTGGCTTTGGCACCTAAATCTGTTGCAGTTTATCGAGCAATTGGAGACGCTCAGAAGGCAGTGAGGGATTCGGTTGGAAACAACGAGGGTGTGCCTCTCCATTTGAGGAATGCTCCAACCAAATTAATGAAGGACATTGGGTATGGGAAGGGATACATTTACACTCCCGACAATCCCTCCGCACCACAAACCTACTTGCCACCATCACTTCAAGGTCACAAGTTCCTCCATTGGCCTCATGAATAA 1545 0.5074 MEMEQLLSMGFPDELAAQALAATGGKSTVKATEWILTHKSNSNSNPSSSASTFQPKLDHFFNSPPQSQPQEEDEPSKRLRHSPSFFFKTPNTDKKHIHEPLYERLRPRTLDDVVGQEHLLAPNSLLRSAVQRNRLPSILLWGPPGTGKTTIARAIVNSTPSSNSSYRFVSLSAVTSGVKDVRDAVDEARKVRVKTKQSTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFIGATTENPSFHLITPLLSRCRLLTLNPLQPHHLALLLNRAVTNTDKGLMQTVGVQVHVSEDVVDFISNNCDGDARVALNALEIAAVTAAAQGMMNVSVSVDDAKEALQCKHVAYDKAGEEHYNVISALHKSMRGSDADAAIYWLARMLEGGEQPLYIARRLVRFASEDVGLADPSALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSVAVYRAIGDAQKAVRDSVGNNEGVPLHLRNAPTKLMKDIGYGKGYIYTPDNPSAPQTYLPPSLQGHKFLHWPHE 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2685 514 SMART AAA_5 134 256 IPR003593 -
Aed3g2685 514 MobiDBLite consensus disorder prediction 38 70 - -
Aed3g2685 514 Gene3D - 256 329 - -
Aed3g2685 514 Gene3D - 336 439 - -
Aed3g2685 514 CDD AAA 114 250 - -
Aed3g2685 514 MobiDBLite consensus disorder prediction 38 90 - -
Aed3g2685 514 Gene3D - 440 514 - -
Aed3g2685 514 Pfam AAA C-terminal domain 283 361 IPR032423 -
Aed3g2685 514 Gene3D - 2 51 - -
Aed3g2685 514 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 15 513 - -
Aed3g2685 514 Gene3D - 89 254 IPR027417 -
Aed3g2685 514 SUPERFAMILY UBA-like 3 43 IPR009060 GO:0005515
Aed3g2685 514 CDD HLD_clamp_RarA 256 336 - -
Aed3g2685 514 Pfam ATPase family associated with various cellular activities (AAA) 138 249 IPR003959 GO:0005524|GO:0016887
Aed3g2685 514 Pfam MgsA AAA+ ATPase C terminal 362 510 IPR021886 -
Aed3g2685 514 SUPERFAMILY post-AAA+ oligomerization domain-like 346 511 IPR008921 GO:0003677|GO:0006260
Aed3g2685 514 Pfam UBA/TS-N domain 4 35 IPR015940 -
Aed3g2685 514 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 38 IPR015940 -
Aed3g2685 514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 328 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2685 98 310 Core DNA Replication Machinery Family AT1G63160 28.241 2.07e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2685 K07478 - gmx:100799257 849.736