Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2682 ATGGCTGCACAAGCTCTTGTATCATCCTCATCTCTTACCTTCTCAGCGGAGGCTGCAAGACAAAGTCTTGGACCAAGATCACTCCAATCTCCATCAAGGAAAGCCTCCTCCTTTATTGTTAAGGCAGCTGCTACTCCCCCTGTCAAGCAAGGAGCAGACAGACCTTTGTGGTTTGCATCAAAGCAAAGTCTTTCTTACTTGGATGGAAGCCTTCCAGGTGACTTTGGATTTGACCCTCTGGGACTTTCAGACCCAGAAGGGACAGGAGGGTTCATTGAACCCAAGTGGCTAGCATATGGTGAGGTGATCAATGGTCGTTATGCAATGTTGGGTGCAGTTGGTGCAATAGCCCCTGAAATTCTTGGGAAGGCTGGTCTCATCCCTCAGGAGACAGCACTCCCATGGTTCAGAACCGGTGTCTTCCCACCTTGCGGTACCTACAACTACTGGGCAGACTCCTACACACTGTTTGTTTTTGAGATGGCACTGATGGGTTTTGCAGAGCACAGAAGATTCCAAGACTGGGCCAAACCAGGGTCTATGGGGAAACAATACTTCTTAGGACTAGAGAAGGGTCTTGGAGGTTCTGGTGACCCAGCTTACCCAGGAGGACCTTTCTTTAATCCTCTTGGTTTTGGTAAAGATGAAAAGTCCTTGAAGGAATTGAAGCTCAAGGAAGTTAAGAATGGAAGGTTGGCTATGTTGGCTATATTGGGTTACTTTATTCAAGCTCTTGTCACAGGTGTTGGCCCATACCAAAACCTCCTAGATCATCTCGCTGACCCCGTCCACAACAACGTCTTGACCAGTCTCAAGCTCCACTAA 825 0.4812 MAAQALVSSSSLTFSAEAARQSLGPRSLQSPSRKASSFIVKAAATPPVKQGADRPLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFRTGVFPPCGTYNYWADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVHNNVLTSLKLH 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2682 274 Pfam Chlorophyll A-B binding protein 65 244 IPR022796 -
Aed3g2682 274 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 273 IPR001344 GO:0009765|GO:0016020
Aed3g2682 274 Gene3D Chlorophyll a/b binding protein domain 56 273 - -
Aed3g2682 274 SUPERFAMILY Chlorophyll a-b binding protein 53 270 - -
Aed3g2682 274 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 8, CHLOROPLASTIC 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2682 Aed-Chr3 28479980 28481088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2682 1 274 Chloroplast and Mitochondria Gene Families AT1G61520 85.401 2.24e-167 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2682 K08909 - gmx:100808379 516.538