Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2680 ATGGCGACCATTATTCCAGACCCTCTGAAGTGGAGTGAGGCAGCAGATTCACTCAAGTCTAGCCACTTTGATGAAGTCAAAAACATGGTGGCTCAGTACCGGAACCCAGTTATCTGTCTGGGTGGCGCTGAGGAGCCACTAACTATATCAAAGGTGGCTGCTGTTGCCAACCATTACTTGCAGGCTAAGGTTCACCTCTCCGAGTCTGCAAGGCCTGGCGTTGATGCCAGCTGCGACTGGATCATGGAAAACATTAACAAAGGCACTCCCATTTATGGTGTTACCACCGGCTTTGGTGCTGCCTCCCACAGGCAAACTCAACAGGCTCTTTCTCTTCAGAAGGAAATGGTTAGGTTTTTAAACTGCGCAATATTTGGCTACCAAACAGAGTTATCTCACACACTGCCTAAATCAGCAACCAGAGCAGCAATGGTTGTGAGGGTTAATACCCTTCTTCAAGGGTACTCAGGAATTAGATTTGAAATCCTAGAAGCTATCACAAAACTCCTAAACCAGAATGTCACCCCCATCTTGCCATTACGTGGTACAATTACTGCGTCTGGTGATCTAATTCCTCTGTCCTACATTGCTGCACTGCTAACCGGTAGGCCAAACAGTAAAGCTGTTGGACCCTCCGGAGAGTCACTTAATGCTAAGGAAGCTTTCCATTTAGCAGGTTTACATTCTGGCTTCTTTGAGTTGAAGCCTAAGGAAGGTCTTGCCATCGTAAACGGCACAGCCGTTGGCTCTGGCGTAGCTTCTACGGTGCTTTTTGAGGCAAACATCTTAGCATTGTTGTCCGAAGTTCTATCAGCCGTTTTTGCCGAAATCATGCAGGGGAAGCCAGAATTTACACATCATCTTATACATAAGCTGAAGTCTCATCCCGGTCAAATTGAAGCTGCCGCTATCATGGAGCACATTCTAGATGGAAGCTCTTATGTCAAAAATGCTAAACTGCAACTGCCAGATCCGTTGCAGAAGCCGAGAAAAGATCGTTATGCTCTTGTAACTTCTCCTCAGTGGCTTGGTCCACAGATTGAAATCATCCGGTATTCGACCAAATCAATTGAAAGGGAGATAAACTCAGTAAATGACAATCCCTTGATTGATGTCACGATGAACAAGGCGCTGAATGGTGGTAATTTCCAAGGAACCCCAATTGGAGTTTCAATGGATAATGCACGTTTAGCCGTTGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACTGAGCTGGTCAATGATTTGTATAATAATGGGCTGCCATCAAATCTTTCTGCTGGTAGAAACCCAAGTCTGGATTACGGTTTTAAGGCATCTGAAGTTGCCATGGCTGCTTATTGCTCTGAACTTCAATATCTGGCAAATCCAGTAACGAGCCATGTGCAGAGTGCCGAGCAGCACAACCAAGATGTGAACTCTTTGGGCTTAATTTCTGCTTTGAAAACTGTCGAAGCCGTTGAGATATTAAAGCTCATGTCTTCCACGTATCTGGTTGCACTCTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTCAAGAACACGGTCAAGAATACTGTAAGCAGAGTTGCACAGAAAACATTAATTACAGAAGACAAAGAAGAAACCAACCCATTTCGACTTTGTGAGAAAGATTTGCTTAAAGTGGTCGATCGAGAATATGTATTTTCCTACATTGACGATCCCTTCAATGTTGCATACCCATTGATGCCAAAACTAAAGCAAGTACTTTATGAACAAGGACACATCAGTGCCATTAATGACAAGAGTGCGAGCTTGTTGATTTTTGAGAAGATTGGAGCTTTTGAGAATGAACTGAAATCTCTCTTGCCAAAGGAAGTTGAAAATGCAAGGGTGGGTTATGAGAATGGAAATCCAGCAGTTCCAAACAGAATTAAGGAGTGTAGGTCATATCCACTGTACAAGTTTGTGAGGGAGGAGTTAGCGATAGGGTTGCTCACCGGAGAAAAGACTCTGTCACCAGATGAGGAATTTGAAAAAGTATATACAGCCATCTGTCAAGCAAAGATTATTGACCCAATTCTCGAATGTCTTGGAGACTGGAACGGCCTTCCCATCCCAATATAA 2097 0.4392 MATIIPDPLKWSEAADSLKSSHFDEVKNMVAQYRNPVICLGGAEEPLTISKVAAVANHYLQAKVHLSESARPGVDASCDWIMENINKGTPIYGVTTGFGAASHRQTQQALSLQKEMVRFLNCAIFGYQTELSHTLPKSATRAAMVVRVNTLLQGYSGIRFEILEAITKLLNQNVTPILPLRGTITASGDLIPLSYIAALLTGRPNSKAVGPSGESLNAKEAFHLAGLHSGFFELKPKEGLAIVNGTAVGSGVASTVLFEANILALLSEVLSAVFAEIMQGKPEFTHHLIHKLKSHPGQIEAAAIMEHILDGSSYVKNAKLQLPDPLQKPRKDRYALVTSPQWLGPQIEIIRYSTKSIEREINSVNDNPLIDVTMNKALNGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISALKTVEAVEILKLMSSTYLVALCQAIDLRHLEEIFKNTVKNTVSRVAQKTLITEDKEETNPFRLCEKDLLKVVDREYVFSYIDDPFNVAYPLMPKLKQVLYEQGHISAINDKSASLLIFEKIGAFENELKSLLPKEVENARVGYENGNPAVPNRIKECRSYPLYKFVREELAIGLLTGEKTLSPDEEFEKVYTAICQAKIIDPILECLGDWNGLPIPI 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2680 698 PANTHER HISTIDINE AMMONIA-LYASE 4 698 IPR001106 -
Aed3g2680 698 Gene3D - 2 246 IPR024083 -
Aed3g2680 698 PANTHER PHENYLALANINE AMMONIA-LYASE 4 698 - -
Aed3g2680 698 Pfam Aromatic amino acid lyase 47 512 IPR001106 -
Aed3g2680 698 SUPERFAMILY L-aspartase-like 7 698 IPR008948 GO:0003824
Aed3g2680 698 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 182 198 IPR022313 GO:0016841
Aed3g2680 698 CDD PAL-HAL 45 509 IPR001106 -
Aed3g2680 698 Gene3D - 512 633 IPR023144 -
Aed3g2680 698 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 7 688 IPR005922 GO:0005737|GO:0006559|GO:0016841
Aed3g2680 698 Gene3D Fumarase/aspartase (Central domain) 247 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2680 Aed-Chr3 28473921 28479104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2680 7 698 Monolignol Biosynthesis Gene Families AT2G37040 72.294 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2680 K10775 - gmx:100787872 1259.2