Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2666 ATGGGCCGGCTTCCTTTCTATATTGGGCTGGACCGGCCGGTGACGTCCACGTGGCTCCCAGATTCTTCTGGAATCGACAAATTTAGCCGTTCTTCAACGCGAAGCATGGAGGAGATAGATGAAGAAGCCTTTCTGTTTGCGATGGAACTAGCGGGTGCCTCTACGTCAGCATTGGAGCTTGGCATCTTAGAAACTATAGCCAAGGCTGGTCCTGGCGCCTACCTTTCCCCTTCTCAGATACTATTAGTAATAGCTGCTGAGAATGAGATCAAGAACCCTGAGGCACCTGCTATGCTTGACCGCATGTTGCGCCTATTGGCTTCCTACAACATTCTCACTGAAACTGAAAGACACTATGGTCTTCACCCAAGAGCCAAATACCTTGTCAACAATGAAGACGGTGTCTCAGTGGCTGCTTACTTTCTCATGGAACATGACAAAGTCCTTAAAGACATGTGGTACCACTTGACAGATTCAGTTAAGGAGGGTGGATATCCATTTAGAAATGCTTATGGAATGTCTGCCTTTGAATTCAATGACACAAATCCTAGATTCAACAACCTTTTCAATAAGGGATTGTCTCATATCTCTAGCATCACAATGAAGAAAATTCTTGAGACCTATAATGGCTTTGAGGGTGTTGGATCTGTGGTTGATGTTGGCGGTAGGACTGGAGCTATTGTTAATATGGTTGCCTCTAAGTATCCCACCACTTACTGTGCTAATTTTGACTTACCTCACGTCATCAAAGAAGCTCCACCTTATACAGGTGTGGAACATATTGGTGGAGACATGTTTTGGATATGCCATGACTGGAATGGCGAGCAATGCTTGAAATTGTTGAAGAACTGTTATGATTCCATTCCTGACACTGGGAAGGTGATTTTGGCTGAAGGCATTATTCCAGAAACCCCAGATTCTAACTTGGCTTCAAAGTGTGAGTTTCAAATGGATCTTATCATGTTGTGTCATAGCCCAAGTGGAAAAGAGAGAACAGAGAAAGAGTACAGGGCCTTGGCTAAAGGAGCTGGATTCCATGGTTTCCGTATAGCATGCTGTGTTCTCAACACACATGTTATGGAATTTCTTAAAAACCCTTAG 1101 0.4414 MGRLPFYIGLDRPVTSTWLPDSSGIDKFSRSSTRSMEEIDEEAFLFAMELAGASTSALELGILETIAKAGPGAYLSPSQILLVIAAENEIKNPEAPAMLDRMLRLLASYNILTETERHYGLHPRAKYLVNNEDGVSVAAYFLMEHDKVLKDMWYHLTDSVKEGGYPFRNAYGMSAFEFNDTNPRFNNLFNKGLSHISSITMKKILETYNGFEGVGSVVDVGGRTGAIVNMVASKYPTTYCANFDLPHVIKEAPPYTGVEHIGGDMFWICHDWNGEQCLKLLKNCYDSIPDTGKVILAEGIIPETPDSNLASKCEFQMDLIMLCHSPSGKERTEKEYRALAKGAGFHGFRIACCVLNTHVMEFLKNP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2666 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 42 364 IPR016461 GO:0008168
Aed3g2666 366 Gene3D - 27 128 IPR036388 -
Aed3g2666 366 Pfam O-methyltransferase domain 153 345 IPR001077 GO:0008171
Aed3g2666 366 Pfam Dimerisation domain 56 107 IPR012967 GO:0046983
Aed3g2666 366 PIRSF O-mtase 26 364 IPR016461 GO:0008168
Aed3g2666 366 PANTHER O-METHYLTRANSFERASE 41 364 IPR016461 GO:0008168
Aed3g2666 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 361 IPR029063 -
Aed3g2666 366 SUPERFAMILY "Winged helix" DNA-binding domain 40 132 IPR036390 -
Aed3g2666 366 Gene3D Vaccinia Virus protein VP39 129 364 IPR029063 -
Aed3g2666 366 PANTHER BNAA10G07250D PROTEIN 41 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2666 Aed-Chr3 28400923 28403368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2666 40 365 Monolignol Biosynthesis Gene Families AT5G54160 55.241 1.62e-134 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2666 K13066 - gmx:100780100 422.935