Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2654 ATGCCTGGTGCTGAGAGAGAGAGCGTTGAGGAAGTGGAAGCGTTCGTGGAGGTTGATCCAACGGGGAGGTTTGGGCGTTACAACGATCTTCTTGGATGCGGAGCTGTGAAGAAGGTGTACAGAGCGTTTGATAAAGAGGAAGGAATTGAGGTGGCGTGGAATCAGGTTCGTCTGAGGAACTTCAGCGAAGACCCTGTTCTGATAAATCGGCTTCACTCTGAGGTGGAGCTTCTGAGAACCCTGGGCAACAAGTACATAATCGTGTGTTACAGTGTGTGGAAGGACGATGAGCGCCACAATATCAATTTCATCACCGAGGTGAAAATTGGTGATCTTGGATTGGCTGCAATAGTGGGACGGAACCATGCAGCACATTCAATTTTAGGGACACCGGAGTACATGGCACCGGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATTTACTCTTTTGGAATGTGCTTGCTTGAAATGGTCACTATGGAGATACCCTACAGTGAATGTGACAGTGTGGCCAAGATATACAAGAAGGTCACCATGGGAATTAAGCCTCAGGCCTTGACCAAAGTCACTGATCCTGAGCTGAAGGAGTTCATTGACAAGTGTATAGCACAGCCAAGGGCAAGACCTTCAGCCACAGATCTCCTTAAGGATCCTTTCTTTAATGAACTCAACAATGATGAAGAATCAACGCCGCCGCCCATCATTTGA 714 0.4776 MPGAERESVEEVEAFVEVDPTGRFGRYNDLLGCGAVKKVYRAFDKEEGIEVAWNQVRLRNFSEDPVLINRLHSEVELLRTLGNKYIIVCYSVWKDDERHNINFITEVKIGDLGLAAIVGRNHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTMGIKPQALTKVTDPELKEFIDKCIAQPRARPSATDLLKDPFFNELNNDEESTPPPII 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2654 237 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 106 226 - -
Aed3g2654 237 Gene3D Transferase(Phosphotransferase) domain 1 104 234 - -
Aed3g2654 237 Gene3D Phosphorylase Kinase; domain 1 8 103 - -
Aed3g2654 237 Pfam Protein kinase domain 106 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2654 237 SUPERFAMILY Protein kinase-like (PK-like) 22 228 IPR011009 -
Aed3g2654 237 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 107 - -
Aed3g2654 237 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 106 226 - -
Aed3g2654 237 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 8 107 - -
Aed3g2654 237 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2654 Aed-Chr3 28335595 28336566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2654 104 223 MAP Kinase Kinase Kinase AT5G55560 79.167 3.76e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aed3g2654 Pkinase 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2654 K08867 - zju:107416987 331.643