Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2651 ATGCAGGCATCAGAGCAACATAGAAGTTCAAGTATGTATTATCAACCATTACAACAAATTGAAGCCTACTGCTTACCGCAATATCGGACTCTAAATCAACAGCTATACTACCATGATGGAGGCCATGGAACTCACTTTCCAACTCCAAGTTCTTCTGAACTTTACTGCACTTTGGAGTCATCTTCTGTAGCTGGCAGCTTCACTCTTAACAACTCTCCTTCAACTGTTAGTTTCTCACCCAATGGTAGCCCCATATCGCAGCAAGACTCTCATTCATATCCACCTGACCAGTATCATTCTCCTGAGAATACCTATGGCTCTCCCATGAGTGGCTCCTGCATAACTGATGATTTAAGCAGCTTCAACTTCAAGCACAAGCTGAGGGAATTGGAAAGTGTAATGCTTGGTCCTGACTCTGATATTCTTGATAGTCATGACAGTGCCATCAGCAATGGAAACAACTTTGTTCCACTTGAGATGGATGTTTGGAGACAGACAATGGTGGCAATTTCTAGCAAAAATCTAAAGCACATCCTTATTGCATGTGCCAAAGCCATTTCAGACAATGATTTGCTAATGGCACAGTGGCTGATGGATGAGTTAAGGCAGATGGTATCGGTTTCTGGTGATCCCATTCAACGGTTGGGAGCATACATGTTGGAAGGACTTGTTGCACGATTGGCTGCCTCTGGGAGTTCAATATACAAATCTTTAAGATGCAAAGAACCAGAAAGTGCTGAGCTTCTCTCTTACATGCACATACTGTATGAGGTTTGCCCCTACTTCAAATTTGGGTACATGTCTGCGAATGGAGCCATTGCAGAAGCTATGAAAGATGAAGACAGAGTCCACATAATTGATTTCCAAATTGCTCAAGGAAGCCAGTGGATCACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATCCGGATAACAGGTATTGATGATTCAACATCAGCTTATGCTCGCGGCGGTGGACTACACATAGTGGGAAGGAGGCTATCAAAGCTAGCTGAGCATTTTAAGGTGCCATTTGAGTTTCATGCTGCAGCTATCTCTGGTTGTGATGTGCAACTACATAACCTTGGAGTTCGAGCGGGGGAAGCTCTGGCTGTAAACTTTGCATTCATGCTACACCACATGCCAGATGAAAGTGTGAGTACTGAGAACCACAGGGATAGGCTGTTGAGGTTGGTTAAGAGCCTATCACCAAAGGTGGTGACACTTGTTGAGCAAGAATCTAACACAAACACTGCTGCATTCTTTCCACGTTTCCTTGAAACTCTTGAATATTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTCCCAGAGAGCATAAAGAGAGAATCAATGTTGAGCAGCATTGTTTGGCAAGAGACTTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAACGACATGAGGTGCTTGGGAAGTGGCGATCTAGATTTGCAATGGCCGGTTTCACCCCTTACCCTTTGTGTTCATTGGTGAATGGAACTATTAAGAAATTGCTTGAAAACTACAGTGATAGATATAGACTTCAAGAGCGAGATGGAGCTCTTTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCTTGGAAATGA 1638 0.4377 MQASEQHRSSSMYYQPLQQIEAYCLPQYRTLNQQLYYHDGGHGTHFPTPSSSELYCTLESSSVAGSFTLNNSPSTVSFSPNGSPISQQDSHSYPPDQYHSPENTYGSPMSGSCITDDLSSFNFKHKLRELESVMLGPDSDILDSHDSAISNGNNFVPLEMDVWRQTMVAISSKNLKHILIACAKAISDNDLLMAQWLMDELRQMVSVSGDPIQRLGAYMLEGLVARLAASGSSIYKSLRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRAGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLEYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLCSLVNGTIKKLLENYSDRYRLQERDGALYLGWMNRDLVASCAWK 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2651 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 545 IPR005202 -
Aed3g2651 545 MobiDBLite consensus disorder prediction 75 106 - -
Aed3g2651 545 Pfam GRAS domain family 175 545 IPR005202 -
Aed3g2651 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Aed3g2651 545 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2651 Aed-Chr3 28325271 28326908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2651 12 545 GRAS Transcription Factor Family AT5G48150 65.926 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed3g2651 GRAS 1.2e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2651 - - gmx:100808300 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2651 3 28325271 28326908 Aed3g2651 3 28325271 28326908 ECH