Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2639 ATGGAAGCAACCAAAGAGGAAGCACTTAAAGCCATAGAGATTGCTGAAAAGCGATTTGCTCTGCGAGACTTTGCAGGTGCAAAAAACTATGCTGTAAAGGCTAAAATGCTCTGTCCAGGATTGGAGGGTATATCTCAAATGGTGGCCACGTTTGAAGTTTACATTGCTTCTGAGGTCAAACATAATGGTGAGCTAGATTACTATTCGATTCTTGGATTAAAACCTTTTGCAGATAAGGAGGCTGTAAAGAAACAGTACAAGAAGTTGGCAGTGTTGCTTCACCCAGATAAGAACAAATGTGTGGGAGCTGATGAGGCATTTAAGCTTGTTTCTGAGGCATGGACTTGGCTATCAGATAGTGCTATGCGCAGTTCTTATGATCTCAAAAGAAATGTGCAGTTGGCTGGAACTAACCAGATGAATATGTCAACCCCTCGTGGTAGGCATGACACCTTTTGGACAATCTGTACCTCTTGTAATGTTCAGTATGAGTATCTGCGCAAGTATGTGAATAAAAGACTCTCTTGTAAGAACTGTCGTGGCACTTTTGTTGCTGTTGAAACTGGGGCGGCCCCAGCAAACGGTTCGTTTCCATATTGTCCTTGGTCATATGTGCCAGGAAATGGGTATGGAAGTCATTCATTTGATGGAGTTACATATGTCCCAACTACTGCCCCCTATTTTAATGGGAATGGGGTCACAGGATACCATTCTGGACATGGATATGAGTATGTTCCAAATGTTTCATTTCAGTGGGGCTCTGCTGGAGTTGTCAATCAAAATGGATCAACTACCTTACCTACTGATTCTGCTCATCGGGCCAATGGAAATGTGAAGAGGGGAAGACCAAAAGTCAAATCAGGAGCTGAGAAGAGGCATCACATGGTAGAGACTGTGATCAATACAAATTCAGATGTACCCTTCTCCTGTAGTGTACCACTGGAAGATAAACTAAGTAGACCTGACAAGAAACAGAAAGTTGTTGTCGGAGCCAGTTTCAGAAATGGCCATGAAGAAAAGGGTTCAAAATGTGCTTCAGAAGCGATAGTGGTGAATGGAAATGATAGCATGGGACATGGCCAAAAGCCTTCCTGCACAGTTGAAGTTCAAACCAAACACTGTTCTGTGGCACCAGCATTTGATGCAAGAAAGTTATTGATTGAGAAAGCCAGGACAGAAATCAGGAAGAAACTGGAGGAGATGAAGTTGTCATCTGAAGCAGCAGCAGCAGCTGCAGCTCTGAATGAGAAAGAAAACTCACAAGCTGAAGTTGGTCAAGTAAAGAAAGAGACATGCAGAAAAGCAGTCCCGAATGTTTCTGGTCTACAATTAGAGAATGGGAAAACTGGTCCAATCTCAATTACTGTCCCGGATTCTGACTTTCATGACTTTGATAAAGATAGGTCAGAGGAATGCTTCAGGCCAAAGCAAATATGGGCCTTGTATGATGAGGAAGATGGAATGCCAAGGTTGTATTGTATGATCCGTGAGGTTGTGTCTGTCAATCCATTTAAGCTTCACATAAGTTACTTGAGTTCCAAAACTGATAGTGAGTTTGGCTCAGTAAACTGGCTTGATTCAGGTTTTACCAAATCTTGTGGAAATTTCAGGGCTTTTAATTCAGATGTTGTTGATCAAGTTAACATATTTTCTCATGTTCTAAGTCGTGAGAAGGCTGGTCGAGGTGGTTGCGTCCGCATGTATCCCAGAAGTGGAGATATTTGGGCTGTATATCGAAATTGGTCACCGGATTGGAACAGATCTACTCCAGATGAAGTGAGGCATCAGTATGAAATGGTTGAGGTTCTGGATGATTACTCTGAGGAACTTGGTGTTTGTGTTAGTCCTCTTATTAAGTTGGCTGGATTTAAAACGGTATATCAGAGTAATACAGACAAGAGTGCCATAAAATGGATACCCAGAAGAGAGATGTTGCGCTTTTCACATCAAGTGCCTTCTTGGTTGCTGAAAGGGGAGGCTGGTAATTTACCTGAAAAGTGTTGGGACCTTGATCCGGCTGCAACTCCAGATGAGCTTCTTCATGCTGCTGCTACAGAACCAAACACTTTGTAG 2073 0.4264 MEATKEEALKAIEIAEKRFALRDFAGAKNYAVKAKMLCPGLEGISQMVATFEVYIASEVKHNGELDYYSILGLKPFADKEAVKKQYKKLAVLLHPDKNKCVGADEAFKLVSEAWTWLSDSAMRSSYDLKRNVQLAGTNQMNMSTPRGRHDTFWTICTSCNVQYEYLRKYVNKRLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVPGNGYGSHSFDGVTYVPTTAPYFNGNGVTGYHSGHGYEYVPNVSFQWGSAGVVNQNGSTTLPTDSAHRANGNVKRGRPKVKSGAEKRHHMVETVINTNSDVPFSCSVPLEDKLSRPDKKQKVVVGASFRNGHEEKGSKCASEAIVVNGNDSMGHGQKPSCTVEVQTKHCSVAPAFDARKLLIEKARTEIRKKLEEMKLSSEAAAAAAALNEKENSQAEVGQVKKETCRKAVPNVSGLQLENGKTGPISITVPDSDFHDFDKDRSEECFRPKQIWALYDEEDGMPRLYCMIREVVSVNPFKLHISYLSSKTDSEFGSVNWLDSGFTKSCGNFRAFNSDVVDQVNIFSHVLSREKAGRGGCVRMYPRSGDIWAVYRNWSPDWNRSTPDEVRHQYEMVEVLDDYSEELGVCVSPLIKLAGFKTVYQSNTDKSAIKWIPRREMLRFSHQVPSWLLKGEAGNLPEKCWDLDPAATPDELLHAAATEPNTL 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2639 690 Coils Coil 387 407 - -
Aed3g2639 690 Pfam Domain of unknown function (DUF3444) 453 659 IPR024593 -
Aed3g2639 690 PRINTS DnaJ domain signature 86 101 IPR001623 -
Aed3g2639 690 PRINTS DnaJ domain signature 68 86 IPR001623 -
Aed3g2639 690 PRINTS DnaJ domain signature 102 122 IPR001623 -
Aed3g2639 690 PANTHER BNAC03G44070D PROTEIN 1 683 - -
Aed3g2639 690 Coils Coil 410 430 - -
Aed3g2639 690 MobiDBLite consensus disorder prediction 265 290 - -
Aed3g2639 690 Gene3D DnaJ domain 55 148 IPR036869 -
Aed3g2639 690 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Aed3g2639 690 CDD DnaJ 66 119 IPR001623 -
Aed3g2639 690 SUPERFAMILY Chaperone J-domain 63 149 IPR036869 -
Aed3g2639 690 SMART dnaj_3 65 122 IPR001623 -
Aed3g2639 690 PANTHER BNAC03G44070D PROTEIN 1 683 - -
Aed3g2639 690 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2639 Aed-Chr3 28233307 28235379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2639 4 284 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.090 3.52e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2639 - - gmx:100792639 1307.35