Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2636 ATGTCTTCTACTTCTTCTTCTTCGTCGTCGTCATCATCATCAGCAATCCCAACCCCAACCCCAACCACATATGACGCTGTTGCTCCAGCTGATATCCCCGGCCCTAGTACGAGGAGAACCGCTGTAGCAGCAGCCTCTCAACGTCAACGTCAACGTCGACCTATGAATGAGGCCTTGCCTGAGCCTTTTCTTGAAGCTTTGGCCACCCAACTTGCCATTGATACTGCCGACACCAACGGACGCCTTGCTGTTGCTCCTGCCCTTGCCAGTTTCTTTCAGGTCTGTTCCATGTGGCGAAGGTCATCGCGGTCGGAACTGTTGTGGCAGCGGCTCACGACACGCATCTGGCGACGCACCCAACGATTGAGGGCTACGTGGCAGTTGGAGTTCATATACTGGCATCGGACGACGAAAAACTTCTCGACTGGTAGTTACACGTTTTTCGAACCGCCGTTGGATCCATCGGATCCGCAGCAACAGCGGGGGCACGAGCAGCTGTGCCGGTGCGTCGTCCTATCAGAAAATCACGTGGCGTGCGGGTTCGTGGACGGAAGCGTGCGTCTTTTCGACATCGAAACCCATGCCCACGTCCTCACTTTTTTGTCCCTGAACAACCACTTCTTTGGCTCCTTCTCGCATTCGGTATCGGGCATCGTTATGGTGAACAACTCGAGCATCAGTTTTGCCAGGCTGGACGGGGATATTTACGTGGATAATGTGAATGGGCATGGGCCAGGACATGGGCCGATCCACGCTCGTCGGGCGGTGGAGGGTGACGTGGTGAACAACGGGGTGATGGCTGGGTTCGTGGGAACAGGGATGTGGTGGGTGGGGCTTTACGCGGGAGTAGCAGGGCAGGCATTCCAAGTGTGGGACGCGATAAACGAGGTGCGGGTGTATGTGGGTGGTTCAGTAACGGAACCAGAAACGGTTATGGGGTGGCACATGCTGACAGAGCTGATTGAACCGGTGGGGAGGCTGAGAGTGACGGAGGGTGAGCTAATAGTGGCGTGCACGCCTTCGATGCTGGTTTGTTTCAACTTACGGAGCCCGGGGCCAGGGGTTATGCTGTGGGAGGAGAGGTCCAACACAGGATTCATGGTTACTAGTATGGACGCGAGTGCTGAGGCGTTTGTTGTGGTGGAGAGGCACGGAGTTGGAACGGTTCGGAGGGGGAGCACGTGGGCTGTCTTGAGCCGGTTTCCTATTAGGGTTCGAGGGGGGTTGCGTGCTTGCATCAACCTTGCATATGTCTTAACCTACTCGCCTAGTGCACCTGTGCCTGCATTGAGGGTTTGGTACATCGAGCCTCAGAATCAGAATGCTATTGCTCAATTGTGTATCTCGCTTGGAGTAGCTGGAGGGGGACTCATCAATGGCATGGTCGTTAATGACAGACACCTCGCCATCTCTTACATCGACAATACCATTAACTTATTGGATTTTGGTGTACAGGATCTTTAG 1464 0.5471 MSSTSSSSSSSSSSAIPTPTPTTYDAVAPADIPGPSTRRTAVAAASQRQRQRRPMNEALPEPFLEALATQLAIDTADTNGRLAVAPALASFFQVCSMWRRSSRSELLWQRLTTRIWRRTQRLRATWQLEFIYWHRTTKNFSTGSYTFFEPPLDPSDPQQQRGHEQLCRCVVLSENHVACGFVDGSVRLFDIETHAHVLTFLSLNNHFFGSFSHSVSGIVMVNNSSISFARLDGDIYVDNVNGHGPGHGPIHARRAVEGDVVNNGVMAGFVGTGMWWVGLYAGVAGQAFQVWDAINEVRVYVGGSVTEPETVMGWHMLTELIEPVGRLRVTEGELIVACTPSMLVCFNLRSPGPGVMLWEERSNTGFMVTSMDASAEAFVVVERHGVGTVRRGSTWAVLSRFPIRVRGGLRACINLAYVLTYSPSAPVPALRVWYIEPQNQNAIAQLCISLGVAGGGLINGMVVNDRHLAISYIDNTINLLDFGVQDL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2636 487 MobiDBLite consensus disorder prediction 1 56 - -
Aed3g2636 487 Gene3D - 108 247 IPR015943 GO:0005515
Aed3g2636 487 SUPERFAMILY WD40 repeat-like 157 481 IPR036322 GO:0005515
Aed3g2636 487 MobiDBLite consensus disorder prediction 1 21 - -
Aed3g2636 487 SUPERFAMILY F-box domain 88 137 IPR036047 GO:0005515
Aed3g2636 487 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 1 485 - -
Aed3g2636 487 PANTHER WD40 REPEAT PROTEIN 12, 37 1 485 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Aed3g2636 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2636 - - gmx:100807240 572.007