Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2618 ATGGCGGGAATCCTAAATCTCACGCCCCTCACCGGTGCCGGATGGGCTCTCCGGCCTCCGGTCAGGTCCTCGATTCGAGCTTTCACGGCGACGATTGATTCCCGGCGACCGGCGAGCTTCTACGAGGTGCTCCGGGTCAAGCAGAACGCGTCGGCGATGGAGATAAAGTCAGCATACCGGAACCTTGCGAAGGTGTATCACCCTGATTCGGTGCTCCGGCGGTCGGAATCGGACGAACGGGACTTCATCGAGATTCACAACGCCTACGAGACGCTGTCGGATCCGTCGGCGAGAGCACTGTACGATGTGTCGTTGATGGCCGCGCGCGGTGGTAATCGCTCGTTCTCGTCTTTGGTAGCTGCTCCGAATGGCTCTTCCGGATTCTACTACTACTACCACCAGACTCGAAAGTGGGAAACGGACCAATGCTGGTAG 435 0.5885 MAGILNLTPLTGAGWALRPPVRSSIRAFTATIDSRRPASFYEVLRVKQNASAMEIKSAYRNLAKVYHPDSVLRRSESDERDFIEIHNAYETLSDPSARALYDVSLMAARGGNRSFSSLVAAPNGSSGFYYYYHQTRKWETDQCW 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2618 144 CDD DnaJ 40 94 IPR001623 -
Aed3g2618 144 ProSitePatterns Nt-dnaJ domain signature. 82 101 IPR018253 -
Aed3g2618 144 Gene3D DnaJ domain 27 120 IPR036869 -
Aed3g2618 144 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 26 144 - -
Aed3g2618 144 Pfam DnaJ domain 40 102 IPR001623 -
Aed3g2618 144 ProSiteProfiles dnaJ domain profile. 39 105 IPR001623 -
Aed3g2618 144 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 26 144 - -
Aed3g2618 144 SUPERFAMILY Chaperone J-domain 39 124 IPR036869 -
Aed3g2618 144 SMART dnaj_3 38 97 IPR001623 -
Aed3g2618 144 PRINTS DnaJ domain signature 77 97 IPR001623 -
Aed3g2618 144 PRINTS DnaJ domain signature 59 74 IPR001623 -
Aed3g2618 144 PRINTS DnaJ domain signature 41 59 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2618 Aed-Chr3 28120544 28120978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2618 41 102 C2H2 Transcription Factor Family AT1G74250 43.939 1.30e-09 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2618 3 28120544 28120978 Aed3g2618 3 28120544 28120978 ECH
Aed4g2331 4 25758399 25758854 Aed3g2618 3 28120544 28120978 PCT