Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2615 ATGGGTACTAAATCAGCTGTGGATTTAATGGAGTTTTCATCCGAGGTTCATTTTTCTGGATTTCACATGGATGGCTTAGAGCAAAGAAAGGCTGCCACAGAGCAACCAACCACTTCGGCAACTGACATGTATAAACAACCTTTTGTGATAGGTGTTGCTGGTGGAGCAGCATCCGGTAAGACATCAGTTTGTGATATGATTGTTCAACAGCTTCATGACCAACGAGTTGTACTTGTTAATCAGGATTCTTTTTACAATAATTTGACTGATGAGGAACGTACAAGAGTACAAGATTATAACTTTGACCATCCTGAAGCTTTTGATACTGAGCAAATGCTACATGTCATGGACAAGTTGAAGCGTAGCCAAGCAGTAGATATTCCAAAGTATGACTTTAAGGGTTACAAGAACGATGTTTTTCCAGCAAGACGGGTGAATCCAGCGGATGTTATTATCTTGGAAGGTATCCTTGTTTTCCATGATCCACGAGTGAGAGCATTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTCTGGCTAGAAGAATTAAGCATGACACTGCTGACAATGCTCGTGATATTGGAGCTGTGCTTGATCAGTATTCTAAATTTGTGAAGCCGGCTTTTGATGACTTTATTCTTCCCACCAAGAAGTATGCTGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCTGTTGATTTGATTGTACAGCATATTCGCACGAAGCTTGTGGTGTCATGGCATTTTCTTCAAGCATTAATGGTCGAATTTCGCTCACTTGACCAGGTTGTAGAACATGGCCTAGGGCATCTTCCATTTACCGAAAAGCAAGTAATCACTCCAACTGGAAAGGTATACAGCGGCGTGGATTTCTGTAAGAGGTTATGTGGTGTCTCCATCATCCGGAGTGGGGAGAGTATGGAAAATGCTTTACGAGCATGCTGCAAAGGCATCAAGATTGGGAAAATTCTTATTCATAGAGAAGGTGACAACGGTAAACAGCTAATTTATGAGAAGTTGCCCAATGACATCTCAAATAGGCATGTATTACTGTTGGATCCCATCTTAGGCACAGGTAATTCGGCTGTTCAAGCGATTTCTTTGATTATAAAGAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTCATATCAGCACCTCAAGGTGTTCATGTGGTCTGTAAAAGCTTTCCGAGAATAAAAATCGTGACATCTGAGATTGATATTGGTTTGAATGGAGATTTCCGTGTCATACCTGGCATGGTCCAGAGATTTTTACTTCATAGCCGGTTATACAATATCTGGAACTCCCAACAAATTTGGAAGCACGCTTTAACCATCATGTCTGCCTTTGTTGGAAAGTACGCAGATGAGCTTATAAAGAATGCAAAGTACATAGCGACAGCTGGGAAGGGTATATTGGCAGCAGATGAGAGCACTGGCACGATAGGGAAGCGTCTATCGAGCATTAACGTAGAGAACATTGAGGCGAACCGGCAAGGGTTGCGGGAACTTCTCTTCACATCTCCAAATGCCCTTCAATACCTCTCTGGAGTGATCCTCTTCGAGGAAACTCTTTACCAGAAGACCTCTGATGGGAAGCCTTTCGTTGAGGTCCTTGAAGAGAACAATGTGATCCCAGGCATCAAAGTGGACAAGGGTGTTGTTGAGTTGGCTGGCACAAATGGTGAAACCACCACACAGGGTTTCGACTCTCTCGGAGCAAGGTGCCAGGAGTATTACAAGGCCGGTGCACGCTTTGCAAAGTGGCGTGCAGTTCTCAAAATAGGTCCCACTGACCCCTCTGAGCTATCCATCCAGCAAAATGCACAGGGTTTGGCACGCTATGCCATAATTTGCCAGGAGAATGGCCTTGTGCCCATTGTTGAGCCTGAGATTTTGACTGATGGCCCTCATGACATCGCCAAATGTGCTGCTGTTACTGAAACTGTGCTTGCAGCTGTTTACAAGGCTCTCAATGACCACCATGTCCTTCTTGAAGGAACTCTTCTCAAGCCCAACATGGTTACTCCCGGCTCTGGTAGCCCCAAGGTAACACCTGAGGTGATTGCTGAGTACACAGTGCAAACACTCCGCAGGACAGTCCCAGCTGCGGTGCCAGGGATTGTGTTTCTGTCTGGTGGGCAAAGTGAAGAAGAAGCTACCCTAAACCTGAATGCAATGAACAAGTTGGAGGTGTTGAAGCCATGGACTCTCTCTTTCTCATTTGGGCGAGCACTTCAGCAAAGCACGCTCAAGACATGGGGTGGAAAGAAAGAGAATGTTGCCAAAGCTCAAGGGGCATTTCTGGCAAGATGCAAGGCCAATTCTGAGGCTACTCTGGGGAAGTTTGTTGCTGGAAGCGTAACTGGGTTGGCTTCTGAGAGTTTGTATGTCAAGGACTACAAGTATTAG 2433 0.4472 MGTKSAVDLMEFSSEVHFSGFHMDGLEQRKAATEQPTTSATDMYKQPFVIGVAGGAASGKTSVCDMIVQQLHDQRVVLVNQDSFYNNLTDEERTRVQDYNFDHPEAFDTEQMLHVMDKLKRSQAVDIPKYDFKGYKNDVFPARRVNPADVIILEGILVFHDPRVRALMNMKIFVDTDADVRLARRIKHDTADNARDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAVDLIVQHIRTKLVVSWHFLQALMVEFRSLDQVVEHGLGHLPFTEKQVITPTGKVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGKQLIYEKLPNDISNRHVLLLDPILGTGNSAVQAISLIIKKGVPESNIIFLNLISAPQGVHVVCKSFPRIKIVTSEIDIGLNGDFRVIPGMVQRFLLHSRLYNIWNSQQIWKHALTIMSAFVGKYADELIKNAKYIATAGKGILAADESTGTIGKRLSSINVENIEANRQGLRELLFTSPNALQYLSGVILFEETLYQKTSDGKPFVEVLEENNVIPGIKVDKGVVELAGTNGETTTQGFDSLGARCQEYYKAGARFAKWRAVLKIGPTDPSELSIQQNAQGLARYAIICQENGLVPIVEPEILTDGPHDIAKCAAVTETVLAAVYKALNDHHVLLEGTLLKPNMVTPGSGSPKVTPEVIAEYTVQTLRRTVPAAVPGIVFLSGGQSEEEATLNLNAMNKLEVLKPWTLSFSFGRALQQSTLKTWGGKKENVAKAQGAFLARCKANSEATLGKFVAGSVTGLASESLYVKDYKY 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2615 810 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 670 680 IPR029768 -
Aed3g2615 810 Gene3D Aldolase class I 442 810 IPR013785 -
Aed3g2615 810 Pfam Uracil phosphoribosyltransferase 268 427 - -
Aed3g2615 810 Pfam Fructose-bisphosphate aldolase class-I 464 810 IPR000741 GO:0004332|GO:0006096
Aed3g2615 810 Pfam Phosphoribulokinase / Uridine kinase family 49 235 IPR006083 GO:0005524|GO:0016301
Aed3g2615 810 Gene3D - 236 432 IPR029057 -
Aed3g2615 810 Gene3D - 15 235 IPR027417 -
Aed3g2615 810 CDD PRTases_typeI 295 410 IPR000836 -
Aed3g2615 810 PANTHER URIDINE KINASE 15 248 - -
Aed3g2615 810 TIGRFAM udk: uridine kinase 46 247 IPR000764 -
Aed3g2615 810 CDD UMPK 49 247 IPR000764 -
Aed3g2615 810 PANTHER URIDINE KINASE 264 415 - -
Aed3g2615 810 CDD FBP_aldolase_I_a 462 790 - -
Aed3g2615 810 PRINTS Uridine kinase signature 179 189 - -
Aed3g2615 810 PRINTS Uridine kinase signature 77 88 - -
Aed3g2615 810 PRINTS Uridine kinase signature 215 228 - -
Aed3g2615 810 PRINTS Uridine kinase signature 122 137 - -
Aed3g2615 810 PRINTS Uridine kinase signature 193 204 - -
Aed3g2615 810 PRINTS Uridine kinase signature 47 64 - -
Aed3g2615 810 PANTHER URIDINE KINASE 15 248 - -
Aed3g2615 810 SUPERFAMILY PRTase-like 267 427 IPR029057 -
Aed3g2615 810 SUPERFAMILY Aldolase 454 810 - -
Aed3g2615 810 PANTHER URIDINE KINASE 264 415 - -
Aed3g2615 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 240 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2615 Aed-Chr3 28095464 28105655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2615 1 427 PRT Gene Family AT4G26510 73.478 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2615 K00876 - gmx:100798205 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2615 3 28095464 28105655 Aed3g2615 3 28095464 28105655 ECH