Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2614 CGCTCATTCATCATCAAATCCACGAGAACCCTGCTTCTGCCTCAGATCCGCTTCGATCTCCATAACACAAAGCTTCACTTTTCCCACTCCCAGGGAAAAATGCCACAGGAAACCTTACTGAACTCAAATTTCATATCTCCTCTTAAGAGAGGATTGAGTTTGAAAGGTTCGGCTTCGGCTTCGGCTTCGGCGTGTAACGACACTGTGACGGAGGAGAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGGTGCGAAGCAGCAGAATGGCTTCGGCAAATGGACAATGGCGCATCTTCTTCACTCTCCAAAGAACCCTCCGAAGAGGAATTCTGCCTCGCACTCCGCAACGGTCTCATTCTCTGCAACGTCCTCAACAAAGTCAACCCCGGCGCTGTCGTCAAGGTTGTCGACAACGCCGTGGTCGACAACCTCGAAGTTCAGTCTTCGGAGGGACCCGCCCAGTCCGCAATTCAGTATTTCGAAAACATGCGAAACTTTCTCGAAGCGGTCAACGACATGAAGCTTTTGACCTTCGAAGCTTCCGATTTGGAAAAGGGGGGTTCGTCGAGCAAAGTTGTGGACTGCATTCTCTGTTTGAAAGGGTATTATGAATGGAAGCTATCGGGTGGGGTTGGGGTGTGGAGGTATGGTGGAACTGTCAGGATTACTTCCTTCCCCAAATGGTCTTCTTCCAACATACTGGGCACTGAAAGTGTTGTTGATGAGTCTGAGTCATCGCAGTTTCTTCATCTGTCTAGAGAGGTTTCAGTTGAAGAAACCAAAGCTGCTAATGCTTTGGCTTCTGTTTTTGATCAGTTTGGACTCAAGCTTTTCCTGGCTTACCTCAGTGAGGCTGATGGGGTTGATGATCTGCCTTTGAATGTAATGGTAATTGATACTTTGCTCAGGAAGGTTGTCATGGATTTTTCTGCATTGCTTGATTCTCAAGGCACTCAGCTTGGACATTTCCTCAAGAAAATATTGAAAGGCAATACTGGTTTCCTCTCCAAGAGAGAATTCATAGAAGCTATCACATTATATCTTAATCAAAGATGTAGTTTGGCATCAAATGAATTCTCTAAACTATGCACTTGCGGTGGAAAACGGGATAATAATCAGCACAATGTCAATTATTCTGCCAAGCATGCTGAAATAATTGATGCCCAGCAAAAAGAGCTCGAGAAACTGAAGTACTTCTATGAAGAGATAAAATCGGAGGTCAAGCAACTTCAATCTAAGTGGGACCAAGAATCGAGAAGGCTTGAGAATCATATAAAGAACCTTGAAGAGGCCTCCTCTTCCTACCACAAAGTTTTGGAGGAGAATCGCTCTCTTTACAATCAAGTACAAGACCTCAAAGGAGCTATTAGGGTCTACTGTAGAGTGAGGCCATTCTTACCAGGACAATCAGATGGACAATCTACCGTAGATTATATAGGAGAAAATGGAAACATAATGATTATGAATCCCCTTAAGCAAGGAAAAGATGCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGCAACAAGTGCCACCCAAGAGCAAATATATGGTGACACTCAACCATTGGTTAGGTCTGCCTTAGATGGCTATAATGTATGCATTTTTGCATATGGACAGACTGGATCAGGAAAGACCTACACAATGAGTGGCCCTGATCTGATGACTGAAGAAACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTCCATATTTCAAAGGAAAGAGCAGATGCCATAAAATATGAAGTCAGCGTCCAGATGATTGAAATATACAATGAACAAGTGAGAGATTTATTAGTCAGCGATGGCTCTAGCAGAAGATATCCTTCAAGCCCATACTTTCTACATACATTGGATATACGAAACAACTCTCAATTGAATGGTCTTAATGTGCCTGATGCATCTTTAGTCCCGGTTAATTGTACTCAAGATGTTCTTGATTTAATGAGAATTGGTCAGAAGAATCGTGCTGTTGGTGCTACTGCTCTAAATGAGCGAAGCAGCCGTTCTCATAGTGTGTTGACAGTTCATGTCAGAGGGAGGGACTTAGTGTCTAACTCCATTCTTAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGACAAATCTGAGGCCGTTGGCGAGAGACTAAAGGAGGCCCAGCATATAAATAAATCTCTTTCTGCACTTGGGGATGTTATCTCTGCTTTGGCACAGAAGAGTCCTCATATTCCTTATAGAAATAGCAAGCTCACACAAGTTCTACAAGATTCATTAGGTGGCCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAAGTCAATGCTCATGGAGAGACAATTAGCACACTTAAGTTTGCAGAGAGGGTTGCAACCATTGAACTTGGTGCTGCTCAATCTAATAAAGAAACTGGAGAAATTCGGGAGCTAAAGGAAGAGATGTCAAATATCAAATCAGCATTGGAGAGGAAGGAAACTGAACTACAACAATGGAAAGCTGGGAATGCACGAAATCCCATAGAATCTCAGAAAGCACCAAGAGCTGTTTCACCTTTCCGCTTGCCCAAAAATGGTACCAGTGACAGCATGAAGCCTGAAAATTTTCAAAGACCCATGGATGATAGAAGCTCTGAGGCTAAAACTTGTTCTTCGGGTAAGCAAAGAAGGTCAAGATTTCCCTCAACATTTACAGAGAAGGACTCCATGCCAAAAATGTCTCTTCTAGCTGAAGAAAAATTAGTGAGCTCAGGGACAGGTAGATCACCATCACCTCCAGTCAGGAGGAGATCAATATCCACAGATAGAGGGTCCGTCATTAAAAGCAAGATCAAAAGTGACACATCAGACAACCAACCAATCTTAAAGCATTCATATCCAACTAGACTACTAGTAAATAAATCCCTTGTCACAATGCCAATGGCCTCATCTACAGACATTAACTCGAGGGTGAATCTGCATTCACAGGAGCCAGTGAAGCAGGACAACACTTGTGAAACTCTCTTCAACCTCCAGAAGGTAAACTCCAGGAAAGTTCATCAAGAACATGAAGAGGAACAAATCAAGCAAGCTATTGTTTCAGTAAGACAAGGTGGTACTAGGAAAAACAAGACTGAAAGTAAGGCCAAGGTTAAGCATCATCAACAATTGCCCTTTAGGATTCAAAAGGCTGATACGATACCTGGTTCTGACATGGAAATTGGCCGTGAAATGACCATGGAGGCACCTCGAAAGAACAATTATTTTGAGCCAGAAAATGATATAAGCCTCGTGGAGTCTGGAGTCAATGGTGTTGTAAATCTTAAAAAGATACAGCAGAACATCTCTAGGAATTCCCAGAACATTGGATCAAGAGGAATAATGCAAGCAGCTGAGCCTTTATTGTCCAGCAGCAAAGTTGAAAACAAAATTTTACTCCATGCTTCAGGTCGCAATCTTAAGGAAGGCACCAATACTTCATTGCCTGAATTTAAAAGGAGTCGATCTACGCCACGTGGAAAGTTTTTTGTTTTATCTTGA 3540 0.4271 RSFIIKSTRTLLLPQIRFDLHNTKLHFSHSQGKMPQETLLNSNFISPLKRGLSLKGSASASASACNDTVTEESINDHELAQRKAEEAASRRCEAAEWLRQMDNGASSSLSKEPSEEEFCLALRNGLILCNVLNKVNPGAVVKVVDNAVVDNLEVQSSEGPAQSAIQYFENMRNFLEAVNDMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKWSSSNILGTESVVDESESSQFLHLSREVSVEETKAANALASVFDQFGLKLFLAYLSEADGVDDLPLNVMVIDTLLRKVVMDFSALLDSQGTQLGHFLKKILKGNTGFLSKREFIEAITLYLNQRCSLASNEFSKLCTCGGKRDNNQHNVNYSAKHAEIIDAQQKELEKLKYFYEEIKSEVKQLQSKWDQESRRLENHIKNLEEASSSYHKVLEENRSLYNQVQDLKGAIRVYCRVRPFLPGQSDGQSTVDYIGENGNIMIMNPLKQGKDARRVFSFNKVFATSATQEQIYGDTQPLVRSALDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAIKYEVSVQMIEIYNEQVRDLLVSDGSSRRYPSSPYFLHTLDIRNNSQLNGLNVPDASLVPVNCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRDLVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEVNAHGETISTLKFAERVATIELGAAQSNKETGEIRELKEEMSNIKSALERKETELQQWKAGNARNPIESQKAPRAVSPFRLPKNGTSDSMKPENFQRPMDDRSSEAKTCSSGKQRRSRFPSTFTEKDSMPKMSLLAEEKLVSSGTGRSPSPPVRRRSISTDRGSVIKSKIKSDTSDNQPILKHSYPTRLLVNKSLVTMPMASSTDINSRVNLHSQEPVKQDNTCETLFNLQKVNSRKVHQEHEEEQIKQAIVSVRQGGTRKNKTESKAKVKHHQQLPFRIQKADTIPGSDMEIGREMTMEAPRKNNYFEPENDISLVESGVNGVVNLKKIQQNISRNSQNIGSRGIMQAAEPLLSSSKVENKILLHASGRNLKEGTNTSLPEFKRSRSTPRGKFFVLS 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2614 1179 MobiDBLite consensus disorder prediction 839 960 - -
Aed3g2614 1179 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 58 1174 - -
Aed3g2614 1179 Coils Coil 808 835 - -
Aed3g2614 1179 SUPERFAMILY BAR/IMD domain-like 383 461 IPR027267 -
Aed3g2614 1179 MobiDBLite consensus disorder prediction 894 909 - -
Aed3g2614 1179 MobiDBLite consensus disorder prediction 875 893 - -
Aed3g2614 1179 ProSiteProfiles Calponin homology (CH) domain profile. 88 212 IPR001715 GO:0005515
Aed3g2614 1179 CDD KISc_C_terminal 461 803 - -
Aed3g2614 1179 Pfam Calponin homology (CH) domain 93 212 IPR001715 GO:0005515
Aed3g2614 1179 Pfam Kinesin motor domain 469 801 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2614 1179 Gene3D - 80 212 IPR036872 -
Aed3g2614 1179 ProSiteProfiles Kinesin motor domain profile. 463 801 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2614 1179 Coils Coil 394 449 - -
Aed3g2614 1179 SMART ch_5 90 210 IPR001715 GO:0005515
Aed3g2614 1179 MobiDBLite consensus disorder prediction 924 938 - -
Aed3g2614 1179 PRINTS Kinesin heavy chain signature 702 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2614 1179 PRINTS Kinesin heavy chain signature 538 559 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2614 1179 PRINTS Kinesin heavy chain signature 751 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2614 1179 PRINTS Kinesin heavy chain signature 671 688 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2614 1179 PANTHER KINESIN-LIKE PROTEIN KLP-3 58 1174 - -
Aed3g2614 1179 SMART kinesin_4 461 809 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2614 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 838 IPR027417 -
Aed3g2614 1179 Gene3D Kinesin motor domain 405 803 IPR036961 -
Aed3g2614 1179 SUPERFAMILY Calponin-homology domain, CH-domain 82 240 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2614 Aed-Chr3 28081214 28088961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2614 399 801 Calmodulin-binding Proteins AT5G65930 40.686 1.64e-75 271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2614 3 28081214 28088961 Aed3g2614 3 28081214 28088961 ECH