Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2612 ATGTCTGTAAACTCAAGGGATCTGTCACTTTCTCCCAAAGTCTTCTCCCTTACCTTGCTTCTCTTATTAAACTCTTTTTTGTTTCCATGCTGTTACTCCCTTAATGAGCAAGGCCAAGCTCTCTTAGCATGGAAAAACAGTTTAAACAGTACTTCAGATGCATTAGCATCTTGGAATCCTTCCAACCCAAGCCCATGCAATTGGTTTGGGGTGCACTGCAACTTAGAAGGAGAGTTGGTTGAGATAAACCTGAAGTTAGTGAACTTGCAAGGTTCACTACCTTCAAATTTTCAACCTCTCAGATCCTTGAAGACTCTTGTCCTCTCATCAACCAACATCACAGGCAGGATTCCAAAGGAAATTGGAGACTACAAAGAGCTTACTGTCATTGATCTCAGTGACAATTCTCTCTTTGGTGAAATCCCAGAAGAAATTTGTCAGCTGAGAAAACTGCAGACTTTAGCTCTCGATACCAACTTTCTTGAAGGCAACATTCCATCCAACATAGGAAATTTATCAAGTCTTGTGAACTTGACACTCTATGACAACAAACTCAGTGGTGAAGTTCCAAAGAGTATTGGCTCCTTAACTGAGCTCCAAGTGTTGAGAGCAGGAGGGAACACAAACCTTAAGGGTGAGGTGCCACGGGACATCGGAAACTGCACCAACTTGATGGTGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAGTCTTCCTTCTTCACTAGGGATGCTGAAAAGAATTCAGACCATAGCCATTTACACAACTCTGCTGTCAGGCCCTATCCCAGAAGAGATAGGGAAGTGCAGTGAGTTGCAGAACCTGTACTTGTATCAGAACTCAATCTCTGGTTCAATCCCAAGTCAGATTGGAGAGCTCAGCAAGCTTCAGAATCTTCTCTTATGGCAAAATAATATAGTAGGTACAATCCCAGAAGAGGTTGGAAGCTGCACTCAACTTCAAGTCATAGACTTGTCAGAAAATCTTCTCACAGGTAGCATACCAACCAGTTTTGGTAAGCTATCAAATCTGGAAGGGCTTCAACTGAGTGTCAATAAACTTTCAGGCATTATACCACCTGAAATCACAAATTGCACTTCCCTGACTCAACTGGAAGTTGACAACAATGCTATTTCTGGGGAGATTCCTCCTCTTATTGGAAACTTAAGAAGCTTGACTCTCTTCTTTGCATGGCAGAACAAGCTCTCAGGAAAAATCCCAGATAGTCTTTCACAGTGCCAAGACCTTCAGGCACTTGATCTCTCTTACAACAATTTAATTGGTTCAATACCCAAACAACTTTTTGGGCTGAGGAACCTCACTAAACTGCTGCTTCTTTCCAATGATTTGTCAGGCTTTATACCACCTGAGATAGGTAACTGCACAAGTCTCTACAGATTGAGGTTAAATCACAATAGACTGTCAGGTACCATTCCATCTGAGATCACCAACTTGAAGAATTTGAACTTTTTGGATGTGAGCAGAAATCATCTTGTAGGGGAGATTCCTTCAACACTATCCAGATGTCAAAATCTTGAATTCCTAGATCTCCATTCAAATAGTCTCATTGGCTCAGTTCCAGACAATCTGCCCAAAAACCTGCAGTTAATCGACCTCTCAGACAACAGGTTAACAGGTGAACTGAGTCATTCCGTTGGTTCATTAACTGAATTAACCAAACTCAACTTGGGAAAGAATCAACTCAGTGGAAGCATCCCAGCAGAGATCCTATCTTGCTCCAAGTTACAACTTCTGGACTTGGGAAGCAATAGTTTCTCTGGAGAAATTCCCAAGGAAGTTGCTCAAATTCCTTCACTAGAAATCTTTCTCAATCTTAGTTGTAACCAGTTTTCTGGTGAAATCCCACCTCAGTTCTCCAGTCTTAGAAAACTTGGAGTGCTTGATCTCTCCCACAACAGGCTATCAGGGAACTTGAAAGCTCTCTCTGACCTTCAGAACCTTGTTTCACTGAATGTTTCCTTCAATGACTTCTCTGGAGAATTGCCTAACACACCATTCTTCCGGAAACTCCCTCTCAACGATCTCACAGGAAATGATGGTCTCTACGTTGTTGGTGGTGTTGACAGAAAGGAAGCCAAGGGTCATGTTAGATTGGCTATGAAGATTATAATGTCCATTCTCCTATGCACCAGTGCAGTGCTAGTACTGCTCACAATCCATGTCTTGATCCGTGCTCATGTTGCTAACAAAGTGCAAATGGGAAACAATAATTGGGTGATAACTTTGTATCAGAAGTTTGAATTCTCTATTGATGACATTGTCCGGAACTTGACATCATCCAATGTGATTGGTACTGGCAGCTCTGGAGTTGTGTACAAGGTCACAGTTCCAAATGGCCAAACACTGGCGGTTAAAAAGATGTGGTCATCAGCAGAGTCAGGAGCGTTTACTTCTGAAATTAAAGCACTAGGTTCAATTAGACACAAGAACATCATCAAGCTTCTGGGTTGGGGATCCAGCAAGAACATGAAGCTGGTGTTTTATGAGTACCTCCCTAATGGAAGCCTGAGCTCATTACTTCATGGTTCAGGAAAGGGAAAAGCAGAATGGGAGACCAGATATGATGTTATGTTAGGAGTGGCTCATGCACTTGCATACTTGCACCATGATTGTGTGCCTTCCATATTGCATGGAGATGTCAAAGCCATGAATGTTTTGTTAGGTCCTGGCTATCAGCCTTACCTTGCTGACTTTGGCCTAGCAAGAATTGCAAGTGAAGATGGTGATTATACTAATTCCAAGCCAGTTCAAAGGCCCTACCTTGCTGGCTCCTATGGATACATGGCTCCAGAACATGCATCTATGCAACGGATCACTGAGAAGAGTGATGTGTACAGTTTTGGTGTGGTCATACTTGAGGTCCTAACAGGAAGGCACCCACTAGACCCAACACTGCCTGGGGGTGCACACTTGGTTCAGTGGGTTAGGAACCACTTAGCAAGCAAAGGAGACCCTTATGACATTCTTGACCCAAAGCTGAGAGGGAGAACTGATTCTACTGCGCATGAAGTGCTACAAATTCTAGCCGTGTCATTTTTATGTGTCAGCAACCGAGCTGAGGACCGTCCAACAATGAAGGACACTGTTGCAATGCTCAAGGAAATTCGACCTGTTGAGGCCTCAACCACAGGTCGTCCTGATGTGTTAAAGGGAGATTTAACAGTGTATACTTCTCCAGCACTTACTATGAATGGTGTTTCACATGGAACTTCTAACTGTTCCTTTAATTTCTCAGAGGACTCAATCTGTTGA 3273 0.4302 MSVNSRDLSLSPKVFSLTLLLLLNSFLFPCCYSLNEQGQALLAWKNSLNSTSDALASWNPSNPSPCNWFGVHCNLEGELVEINLKLVNLQGSLPSNFQPLRSLKTLVLSSTNITGRIPKEIGDYKELTVIDLSDNSLFGEIPEEICQLRKLQTLALDTNFLEGNIPSNIGNLSSLVNLTLYDNKLSGEVPKSIGSLTELQVLRAGGNTNLKGEVPRDIGNCTNLMVLGLAETSISGSLPSSLGMLKRIQTIAIYTTLLSGPIPEEIGKCSELQNLYLYQNSISGSIPSQIGELSKLQNLLLWQNNIVGTIPEEVGSCTQLQVIDLSENLLTGSIPTSFGKLSNLEGLQLSVNKLSGIIPPEITNCTSLTQLEVDNNAISGEIPPLIGNLRSLTLFFAWQNKLSGKIPDSLSQCQDLQALDLSYNNLIGSIPKQLFGLRNLTKLLLLSNDLSGFIPPEIGNCTSLYRLRLNHNRLSGTIPSEITNLKNLNFLDVSRNHLVGEIPSTLSRCQNLEFLDLHSNSLIGSVPDNLPKNLQLIDLSDNRLTGELSHSVGSLTELTKLNLGKNQLSGSIPAEILSCSKLQLLDLGSNSFSGEIPKEVAQIPSLEIFLNLSCNQFSGEIPPQFSSLRKLGVLDLSHNRLSGNLKALSDLQNLVSLNVSFNDFSGELPNTPFFRKLPLNDLTGNDGLYVVGGVDRKEAKGHVRLAMKIIMSILLCTSAVLVLLTIHVLIRAHVANKVQMGNNNWVITLYQKFEFSIDDIVRNLTSSNVIGTGSSGVVYKVTVPNGQTLAVKKMWSSAESGAFTSEIKALGSIRHKNIIKLLGWGSSKNMKLVFYEYLPNGSLSSLLHGSGKGKAEWETRYDVMLGVAHALAYLHHDCVPSILHGDVKAMNVLLGPGYQPYLADFGLARIASEDGDYTNSKPVQRPYLAGSYGYMAPEHASMQRITEKSDVYSFGVVILEVLTGRHPLDPTLPGGAHLVQWVRNHLASKGDPYDILDPKLRGRTDSTAHEVLQILAVSFLCVSNRAEDRPTMKDTVAMLKEIRPVEASTTGRPDVLKGDLTVYTSPALTMNGVSHGTSNCSFNFSEDSIC 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2612 1090 Gene3D Ribonuclease Inhibitor 531 608 IPR032675 -
Aed3g2612 1090 ProSitePatterns Serine/Threonine protein kinases active-site signature. 882 894 IPR008271 GO:0004672|GO:0006468
Aed3g2612 1090 SUPERFAMILY L domain-like 32 311 - -
Aed3g2612 1090 ProSiteProfiles Protein kinase domain profile. 764 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2612 1090 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1055 - -
Aed3g2612 1090 SUPERFAMILY RNI-like 286 659 - -
Aed3g2612 1090 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1055 - -
Aed3g2612 1090 SUPERFAMILY Protein kinase-like (PK-like) 753 1039 IPR011009 -
Aed3g2612 1090 PRINTS Leucine-rich repeat signature 534 547 - -
Aed3g2612 1090 PRINTS Leucine-rich repeat signature 628 641 - -
Aed3g2612 1090 Pfam Protein kinase domain 767 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2612 1090 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Aed3g2612 1090 Gene3D Transferase(Phosphotransferase) domain 1 838 1053 - -
Aed3g2612 1090 Gene3D Phosphorylase Kinase; domain 1 730 837 - -
Aed3g2612 1090 SMART LRR_typ_2 100 124 IPR003591 -
Aed3g2612 1090 SMART LRR_typ_2 628 651 IPR003591 -
Aed3g2612 1090 SMART LRR_typ_2 293 317 IPR003591 -
Aed3g2612 1090 SMART LRR_typ_2 437 461 IPR003591 -
Aed3g2612 1090 SMART LRR_typ_2 510 533 IPR003591 -
Aed3g2612 1090 SMART LRR_typ_2 485 509 IPR003591 -
Aed3g2612 1090 SMART LRR_typ_2 341 365 IPR003591 -
Aed3g2612 1090 SMART LRR_typ_2 555 579 IPR003591 -
Aed3g2612 1090 SMART LRR_typ_2 148 172 IPR003591 -
Aed3g2612 1090 Gene3D Ribonuclease Inhibitor 34 192 IPR032675 -
Aed3g2612 1090 Gene3D Ribonuclease Inhibitor 431 530 IPR032675 -
Aed3g2612 1090 Gene3D Ribonuclease Inhibitor 609 693 IPR032675 -
Aed3g2612 1090 Pfam Leucine rich repeat 319 378 IPR001611 GO:0005515
Aed3g2612 1090 Gene3D Ribonuclease Inhibitor 206 430 IPR032675 -
Aed3g2612 1090 SMART LRR_sd22_2 172 198 - -
Aed3g2612 1090 SMART LRR_sd22_2 531 557 - -
Aed3g2612 1090 SMART LRR_sd22_2 485 514 - -
Aed3g2612 1090 SMART LRR_sd22_2 317 346 - -
Aed3g2612 1090 SMART LRR_sd22_2 269 295 - -
Aed3g2612 1090 SMART LRR_sd22_2 628 653 - -
Aed3g2612 1090 ProSitePatterns Protein kinases ATP-binding region signature. 770 793 IPR017441 GO:0005524
Aed3g2612 1090 ProSiteProfiles Leucine-rich repeat profile. 630 652 IPR001611 GO:0005515
Aed3g2612 1090 SMART serkin_6 764 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2612 Aed-Chr3 28068766 28072704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2612 31 1089 Receptor kinase-like Gene Family AT5G56040 65.075 0.0 1390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed3g2612 Pkinase 2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2612 - - gmx:100813139 1964.89