Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2608 ATGCAGTTGACTCACGATATTCAAACTATATTATTGGACTACTTGGCTTCAACCAAGTTCTCATTAGCATCCAATATCATGGAGAAGGAAAGAGAAGATGAGATTGAGAACATGTCAATGTCACCTCCATCTATTGGCTCCATGCAGATTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCCAAATATGTACACTGAGATTAACATAAAAGTTGGGGATTCCAGTTTAAACCAAGATCCCCCCCTCCCCATTTATCTCAAGTTTGAAGATGTAGAGTTCAAGGTGAGAGATAGCCAAGCGGCTTTCAATAACCCCGTGAAGACAATGATGTCAAAAGCAGCCACACAAAACCACCTGGAGGAAGGTAGATACAAGAAAATTTTGACGAGTATTACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGGAAAACAACCTTGTTGAGAGTTGTAGGGGGAAGATTAATTGACAATGTAAAAGGGAAGATAACTTATAATGATGTTCGATTTAATCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAGGAAACATTAATATTCTCTGCATTCTTAAGGCTGCCAAGCAATATGAGCAAGCAAGAAAAATATGCTAGAGTGGAGACCACTGTCAAGGATCTAGGCCTTGAAAGATGCCGCCACACAAAAATAGGTGGAGGATATCTCAAAGGCATATCTGGAGGAGAAAGGAAGCGAACCAGCATAGGCTATGAAATCCTTGTTGATCCTTCACTGCTGCTACTTGATGAACCAACTTCAGGTCTTGATTCCACCTCAGCAAACAAACTCCTTCTCACTCTTCAGGGGCTTGCCAAGGGTGGAAGGACCATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCCATTTACTATGGGAAGGCTAAGGACTCATTACAGTACTTTTCATCCTTGAGGTTCATACCGGAAATACCAATGAATCCTGCAGAGTTCTTGCTTGATTTGGCAACTGGACAAGTGAATAACATAAGCGTCCCACAAGATATTTTGAAAGATCAGGAATCTGCTGACTCTTCAAAAGCTGTTATTAACTATCTACAACACAAGTACAAAGACACACTGGAGCCAAAAGAAAAAGAAGAGAATCATGGAGCAGCAAACACAGCAGAACATCTTCAGCTAGCCATTCAGGTTAAAAAGGACTGGACAGTGAGTTGGTTGGACCAATTCATTATTCTTTATAAGAGAACATTCAGAGCAAGAAGCAAGGACTATTTTGATAAACTAAGACTAGTTCAAGCACTTGGCATTGCACTTTTGTTGGGGCTACTTTGGTGGAAATCTTGTACCAATACAGAGGCTCAAGTTAGAGATCAGGTAGTTGGTTTAATGTTCTATATCTGTATATTCTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTCTTTCCATTTGAAAAGGTCTACTTGGTGAAAGAAAGAAAAGCAGACATGTATAGATTGAGTGTGTACTATGCAAGCAGCACTCTGTGTGACATGGTGGCGCATGTTTTCTATCCTACTTTTTTCATGCTAATATTGTACTTCATGGCCGGATTTAAGAGGACTGTAGCTTGCTTCTTCCTGACTTTGTTCGCGGTGCTGTTAATAGCTATAACAAGTCAAGGAGCAGGAGAACTATTTGGGGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTAATGTTGTTCCTTCTCACAGGGGGCTACTATGTCCAGCACGTGCCGAAGGTGATGCAGTGGTTGAAGTATTTGTCGTTCGTGTACTATGGGTTCAGACTTCTACTAAAAGTGCAGTATTCAGGAGACCAACCATATGAGTGTGAAAGCGAAGGAGGGTGCAGGGCACTGCAGAGTTCACCATCATTTGACACTGTAAACTTGGAAGGAGGCTTAACTGAAGCATGGGTTCTGGTAGCCATGGCTCTATGCTTCCGCGTCTTAGCTTACTTCTGTCTCCGCAGACGAATTGACGTTTGCAATTAG 2142 0.4206 MQLTHDIQTILLDYLASTKFSLASNIMEKEREDEIENMSMSPPSIGSMQIAGSNGFGHSMEFMSQAYLPNMYTEINIKVGDSSLNQDPPLPIYLKFEDVEFKVRDSQAAFNNPVKTMMSKAATQNHLEEGRYKKILTSITGSIGPGEILALMGPSGSGKTTLLRVVGGRLIDNVKGKITYNDVRFNPAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPSNMSKQEKYARVETTVKDLGLERCRHTKIGGGYLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKAKDSLQYFSSLRFIPEIPMNPAEFLLDLATGQVNNISVPQDILKDQESADSSKAVINYLQHKYKDTLEPKEKEENHGAANTAEHLQLAIQVKKDWTVSWLDQFIILYKRTFRARSKDYFDKLRLVQALGIALLLGLLWWKSCTNTEAQVRDQVVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYASSTLCDMVAHVFYPTFFMLILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHVPKVMQWLKYLSFVYYGFRLLLKVQYSGDQPYECESEGGCRALQSSPSFDTVNLEGGLTEAWVLVAMALCFRVLAYFCLRRRIDVCN 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2608 713 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 29 709 - -
Aed3g2608 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 94 358 IPR003439 GO:0005524
Aed3g2608 713 Pfam ABC transporter 137 286 IPR003439 GO:0005524
Aed3g2608 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 350 IPR027417 -
Aed3g2608 713 Gene3D - 124 353 IPR027417 -
Aed3g2608 713 CDD ABCG_EPDR 132 340 - -
Aed3g2608 713 SMART AAA_5 145 336 IPR003593 -
Aed3g2608 713 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 29 709 - -
Aed3g2608 713 Pfam ABC-2 type transporter 443 652 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2608 Aed-Chr3 28043135 28046223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2608 134 319 Calmodulin-binding Proteins AT2G36910 30.890 9.63e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2608 K05681 - gmx:100783094 1268.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2608 3 28043135 28046223 Aed3g2608 3 28043135 28046223 ECH