Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2583 ATGTGGGATGTAGCAAAAGGTGGTGGTGTTAGGAATTACATTAGTTGGGAAGATTTGCAGGTTGATGAGCAAAGGTTGGGTTTGAATTCCCATAACAGCGAGGTTAGTGTTATTATTGTTAAGCAGGATGGTTTTGGACATTCCAAAACTGTTCAAGGTGCTGTCAATATGGTTCCTCATGATAACAGACATAGGGTCAAAATTTACATTTATCCAGGAATTTACAGAGAAAAAGTGCATGTGCCTTTGACGAAGCCTTATGTATCATTTATAGGGAAAAGAAATGAAACAGCAAGTGCTGTTATTACTTGGAACAGTAAGTCATCTGATAAAGGTCCAAATGGAACAGCATTGGGAACCTATGATTCAGCAACAGTGGGAGTCGACTCAAATTATTTCTGTGCAACTGGGGTCACTTTTGAGAACTCAGTGATTTCAACGGCTGGTGGAAAAGGGATGCAAGGAGTGGCACTTAGAGTAAACAGTGAAAGAGCAATGTTCTATCGAGTGAGGATTAAGGGAACACAGGACACACTCTTGGACAACACAGGAAACCATTACTTCTTAAAGTGTCGCATCATAGGAAAAGTTGATTTTATCTGTGGCAGCGCAAAGTCACTCTATGAGAAGTGTCGTCTTCAATCAATAGCTGAGAACTATGGAGCAATAGCAGCACATCATAGGAATTCACCAACAGAAGACACAGGTTTTTCATTTGTAGAGTGCAGTATTAGAGGAAGTGGCAGTGTGTACCTTGGCAGAGCATGGGGTAACTACTCAAGAATTATTTACTCCAAATGTAATATGGATGGCATAATCAATCCCATAGGCTGGTCAGACTGGAATCTTTCACATAGAAAGAAGACTGCAGTGTTTGGTGAGTATGAATGCAAGGGAAGAGGAGCAGATAGAAGACATAGGGTACCTTGGTCAAAATCATTCAACTATCATCAAGCAATGCCTTTCCTTTACAAGAGCTTCATAGATGGAGACCAGTGGCTCAGACTCTAG 1011 0.4095 MWDVAKGGGVRNYISWEDLQVDEQRLGLNSHNSEVSVIIVKQDGFGHSKTVQGAVNMVPHDNRHRVKIYIYPGIYREKVHVPLTKPYVSFIGKRNETASAVITWNSKSSDKGPNGTALGTYDSATVGVDSNYFCATGVTFENSVISTAGGKGMQGVALRVNSERAMFYRVRIKGTQDTLLDNTGNHYFLKCRIIGKVDFICGSAKSLYEKCRLQSIAENYGAIAAHHRNSPTEDTGFSFVECSIRGSGSVYLGRAWGNYSRIIYSKCNMDGIINPIGWSDWNLSHRKKTAVFGEYECKGRGADRRHRVPWSKSFNYHQAMPFLYKSFIDGDQWLRL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2583 336 Gene3D - 33 336 IPR012334 -
Aed3g2583 336 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 336 - -
Aed3g2583 336 Pfam Pectinesterase 38 331 IPR000070 GO:0030599|GO:0042545
Aed3g2583 336 PANTHER PECTINESTERASE QRT1 11 336 - -
Aed3g2583 336 SUPERFAMILY Pectin lyase-like 37 334 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2583 Aed-Chr3 27923635 27925130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2583 10 288 Carbohydrate Esterase AT5G55590 53.356 3.74e-113 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2583 K01051 - gmx:100813382 610.142