Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2578 ATGGTGTTTGAGCTTCATATTTCCCTATCTACAATCCCTCCTTTCTTCCTCTTAGTGTTCATGCTAATAATCAACATACTTTGGAGATCAAAAACCAACAATTCAAACTCCAAGTTGCCACCAGGACCAAGGAAGCTACCACTCATAGGGAACATACACCACCTTGGAACTCTGCTTCATAGGTCCCTAGCAGAATTGGCACATCAATATGGTCCTCTCATGCATTTGCAGCTTGGTGAGCTTTGCTGCATAGTGGTATCTTCGCCCGAAATAGCAAAAGAAGTGATGAACACACATGATATCATCTTTGCAAATAGGCCCTATGTGCTTGCTGCTGATGTTATCACTTATGGCTCTAAGGGCATGTCCTTCAGCCCTCATGGAACTTATTGGAGGCAGATGAGAAAGATTTGCACCATGGAACTGCTATCACCAAAGCATGTTGACTCCTTCAGATCAATCAGGGAACAAGAGTTGTCAAATTTTGTCAAGGAGATATCTTTGAGTGAAGGGTCGCTTACCAATCTCGGTGAGAAGATTAATTCATTGGCATATGGGCTTATGTCACGGATTGTTTTGGGTGAAAAAACCAAAGACCAAGAGGCATATATGGAACATATGAAGGGTGTCGTTGAGACAGTTGCAGGGTTCTCTCTTGCTGATCTCTATCCTTCCATTGGACTTGTTCAAATTCTTACTGGGATTAGGACTAGAGTTGAGAAGATCCATCAAGGAATGGATAGGATACTTGAAAACATTGCTGTTGGTGAAGAAAAAGGGGAAGATCTAGTTGATGTTCTTTTGAGGCTTCAGAAGAATGGTGACCTCCAGCACCCCCTATCTGACACTGTTGTCAAAGCAATCATTTTGGACATTTTCAGTGCTGGAAGCGACACTTCATCAACAATTATTGTTTGGGTGATGTCAGAATTGGTGAAGAACCCGAGGGCGATGGAGAAAGTGCAAACTGAGGTAAGAAGGGTGTTTGATGGAAAAGGATATGTAGATGAAACAAGTATTCATGAACTGAGATACTTGAAATCTGTTATCAAAGAAACTCTGCGTCTACATCCACTTGCTCCATTGCTGCTACCAAGGGAATGCAGTGAGAGATGTGAGATTAATGGGTATGAGATACCAACCAAAAGCAAAGTCATTGTTAATGCATGGGCAATTGGGAGGGATCCTAACTATTGGATTGAGGCTGAGAAATTTAATCCAGAAAGGTTCCTTGATAACTCAATTGATTACAAAGGTGGTGAGTTTGAGTTTATTCCATTTGGAGCAGGAAGGAGGATATGCCCTGGCATCAATCTTGGTATTGTTAATGTTGGATTCTCACTTGCAAATTTGCTTTTCCATTTTGACTGGAAAATGGCTCAAGGGAATAATAGGCCTGAGGAACTTGATATGACTGAATCCTTTGGCTTGTCATTAAAAAGAAAACAGGATTTGGAGTTGATTCCTATCACTTACCACACAGCTACTACAATATAA 1497 0.4122 MVFELHISLSTIPPFFLLVFMLIINILWRSKTNNSNSKLPPGPRKLPLIGNIHHLGTLLHRSLAELAHQYGPLMHLQLGELCCIVVSSPEIAKEVMNTHDIIFANRPYVLAADVITYGSKGMSFSPHGTYWRQMRKICTMELLSPKHVDSFRSIREQELSNFVKEISLSEGSLTNLGEKINSLAYGLMSRIVLGEKTKDQEAYMEHMKGVVETVAGFSLADLYPSIGLVQILTGIRTRVEKIHQGMDRILENIAVGEEKGEDLVDVLLRLQKNGDLQHPLSDTVVKAIILDIFSAGSDTSSTIIVWVMSELVKNPRAMEKVQTEVRRVFDGKGYVDETSIHELRYLKSVIKETLRLHPLAPLLLPRECSERCEINGYEIPTKSKVIVNAWAIGRDPNYWIEAEKFNPERFLDNSIDYKGGEFEFIPFGAGRRICPGINLGIVNVGFSLANLLFHFDWKMAQGNNRPEELDMTESFGLSLKRKQDLELIPITYHTATTI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2578 498 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 493 - -
Aed3g2578 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Aed3g2578 498 Pfam Cytochrome P450 40 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 Gene3D Cytochrome P450 25 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 SUPERFAMILY Cytochrome P450 40 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2578 498 PANTHER CYTOCHROME P450 71B11-RELATED 13 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2578 Aed-Chr3 27897671 27899831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2578 15 490 Cytochrome P450 AT5G25140 42.041 2.18e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2578 - - gmx:100776770 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2578 3 27897671 27899831 Aed3g2578 3 27897671 27899831 ECH