Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2576 ATGTTGTCTCTTCTCTCACCATTTTCCACTCATGTTCTCCTCAAACCCATTTTCCTTCATGGCTTGTCCGCCTTCATCCACCTTCTGTTTCTGCTTGCAGTTTTGCTGTCATGGCTTTGGAAGAAATTCACAGCAGCTGCCAGGGGCGAGTCTAAGGACAAACCCAACAACACCCTCTTTAAAACGACCGTGTTTTGTTCACTTGGTGTTTCCGCTTTCAATCTTCTCCTCTCTCTTTTTAATTACTACTACTGGTTTACAAGTGGCTGGTCAGAAGAAAACTTCGTCACCCTTTTGGATTTGGCGCTAAAAACGCTTGCTTGGGGAGTTTTTTGCGTTTGCTTGCAAAAGGGGTTCTTCAGTTCGGGCCAAAGAAGCTTCTCTTCCTTCTTCAGAGCCTGGTGCGCTTTCTACCTCTTTGTTTCTTTCTATTGCTTCGTGGTGGACATTGTTGTTATATCAGAGGGACGCGTTGCTCTGCCAACTCAGCACTTGGTTTCTGATGTGGTGTCCACTTGTGTTGGTTTGTTCTTCTGCTACGTCGGCTATTTTGTGAAAAACGAGGTTCATGTTCATAACGGTATTCAGGAACCTCTTTTGAATGGTGATCCCTTGGAGTCAAAAAAGACCAAGGGTGGGGACACTGTTACCCCTTTCTCGTATGCTGGGATTTTGAGCATTCTTACCTTCTCTTGGGTGGGTCCTCTTATAGCTGTTGGCAATAAGAAGACCTTGGACCTTGAGGATGTTCCTCAACTAGACAGTAGAGACAGTGTAGCTGGTGCTTTTCCAAGTTTCAGAGATAAACTTGAGGCTGATTGTGGTTCAATTAATAGTGTGACCACACTGAAGTTGGTGAAGTTGTTACTAATGTCAGCATGGAAGGAGATTCTTTTCACAGCTTTGCTTGCATTGTTGAACACTCTGGCATCTTATGTTGGTCCTTATCTTATTGATGGTTTTGTTCAGTACCTCGATGGACAACGGCTGTATGAAAACCAGGGCTATGCTTTGGTTTCTGCATTTTTCTTTGCAAAGCTTGTGGAGTGCCTGACCCAAAGGCATTGGTACTTTAGGTTGCAGCAAATTGGACTCCGAATCCGAGCGCTGCTTGTAACGATGATCTATAACAAAGCTCTGACCCTTTCTTGTCAATCAAAGCAGGGCCACACTTCTGGGGAAATAATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGTATCTTCAGTTGGTATTTGCATGATTTGTGGATGGTGGCTCTGCAAGTTACGTTAGCCTTATTGATTTTGTATAAAAACCTTGGGCTGGCTTCTATTGCTGCTTTAGTTGCAACTGTTGTTATTATGTTAGCAAATGTTCCCTTGGGATCATTGCAAGAGAAGTTTCAAAAGAAGTTGATGGAGTCAAAAGATGCAAGAATGAAGGCCACGTCTGAGGTTTTAAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCAAAGATAACTGAGCTCAGGAAAACTGAGCAAGGTTGGCTAAAAAAATATGTTTACACTGCAGCCATGACCATGTTTGTCTTTTGGGGTTCCCCCACATTTGTATCTGTGGTTACTTTTGGTACTTGTATGCTTATAGGGATCCCCCTTGAATCAGGGAAGATCTTGTCTGCACTTGCAACGTTCCGGATTCTTCAAGAGCCCATTTACAGTCTTCCTGATACAATTTCGATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTGTGTCATACCTTCGTCTTGATGACTTACAGTCCGATGTTGTAGAGAAGCTTCCTTGGGGCAGTTCTGATGCAGCAATTGAAGTAGTTGATGGAAAATTCTCTTGGGATTTATCTTCCCCTAATCCAACATTGCGAAATATAAATCTTAAAGTTTTTCATGGGATGAAAGTTGCTGTTTGTGGTACTGTTGGATCAGGCAAGTCAACTTTACTTTCTTGTGTATTGGGAGAAGTACCAAAGATATCAGGCATCCTTAAGATTTGTGGAACAAAGGCCTATGTTGCTCAATCTCCATGGATACAAAGTGGTAAGATAGAGGATAATATATTGTTTGGTGAATGCATGGATAGGGAAAGGTATGAGAAGGTACTTGAAGCCTGTTCCCTTAAGAAGGATCTGGAGACTTTGTCATTTGGTGATCAGACAATTATAGGAGAACGTGGAATAAATTTGAGTGGTGGACAGAAACAAAGAGTACAAATTGCACGGGCACTTTACCAAGACGCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTTGATGCTCACACAGGCTCTCACCTCTTTAAGGAATGCTTGCTGGGCCTTTTAAGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATATTGGTCATGAAAGATGGGAAAATTACTCAATGTGGAAAGTATACTGAACTGCTTAATAATAGTGGTGCTGATTTTATGGAACTTGTTGGTGCACACAAAAAAGCTTTGTCTACACTAGATTCATTGGATGGAGCGACAGTATCTGATGAAATAAGTGCCTTGGAACAAGATGTAAACGTCTCTGACACACATGGTTTTAAAGAAGATGCTAGCAAAGATGAGCAAAATGGTAAAACAGACAATAAAAGTGAATCACAAGGCCAGCTTGTTCAGGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTCTATTGGAAATGTATCACAACAGCATATGGAGGAGCTCTTGTACCATTCATATTGTTGGCTCAGATTCTTTTTCAAGCTCTTCAAATTGGAAGTAATTATTGGATGGCTTGGGCGACTCCCATCTCAGCAGATGTGGAGCCACCTGTTGAAGGAACGACTCTTATAGTAGTCTATGTTGGTTTGGCCATTGGAAGTTCTTTCTGCATCCTTGCCAGAGCAATGCTTCTTGTCACAGCTGGTTATAAAACAGCTACTATACTCTTCAATAAAATGCACTTCTGCATTTTCCATGCTCCAATGTCATTTTTCGATTCCACTCCAAGTGGACGAATCCTTAACAGAGCTTCAACTGATCAAAGTGCATTGGATACAGACATTCCTTATCAAATTGCATCATTTGCCTTCATTTTGATCCAGCTTCTGGGAATTATAGCAGTGATGTCTCAGGCTGCATGGCAGGTTTTCATTGTCTTTATACCTGTGATAGCAATCAGCATCTGGTATCAGCAATATTATATTCCATCAGCTCGAGAACTATCACGTTTAGTTGGAGTCTGCAAAGCCCCAATCATTCAACACTTTGCTGAAACAATTTCTGGTACTTCAACCATTAGAAGCTTCGATCAGCAGTCAAGATTTCAGGAATCAAATATGAAACTGTCCGATGGGTATTCAAGGCCAAAGTTCAATATTGCTGGTGCCATGGAATGGCTGTGCTTCCGCTTAGATATGTTGTCTTTGATCACATTTGCCTTTTCCTTAACATTCTTAATATCTATTCCACAGGGAGTCATTGATCCAGGCCTTGCTGGTTTAGCTGTTACGTATGGACTTAATTTGAACATGATACAAGCTTGGATGATATGGAATCTCTGCAATATGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTATACTTGTATTCCTAGTGAGCCTCTCCTTATTGTGGATGAAAATCGGCCAGATCCTTCTTGGCCCTCATATGGCGAGGTTGATATACAAGATTTGCAGGTTCGTTATGCTCCACATCTTCCGCTTGTGTTGCGTGGTCTTACATGCAAATTTCGTGGTGGACTGAAAACTGGCATTGTTGGTAGAACAGGAAGTGGTAAAACCACTCTCATACAAACAATTTTCCGAATTGTTGAGCCTACTGCTGGGCAAATTATGATTGACAGAATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAGGATCCAACTATGTTTGAAGGGACAGTGAGAAATAATCTGGACCCCCTGGAAGAATACACTGATGAACAAATTTGGGAGGCCTTGGAGAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTCCAAAGTTACTGAGAATGGGGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTCTGCCTTGGCAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAACAACAGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCTCTGACTCTACAGTTATTACCATTGCACATCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTGCTTCTCAGTCAAGGACTTATTGAGGAGTATGACACCCCAACAAGGCTTCTAGAGAATAAGTCATCATCTTTTGCTCAACTTGTTGCTGAGTATACCATGAGGTCCAACTCCAGTTTTGAGAAATCTGATGATCAGTGA 4479 0.4133 MLSLLSPFSTHVLLKPIFLHGLSAFIHLLFLLAVLLSWLWKKFTAAARGESKDKPNNTLFKTTVFCSLGVSAFNLLLSLFNYYYWFTSGWSEENFVTLLDLALKTLAWGVFCVCLQKGFFSSGQRSFSSFFRAWCAFYLFVSFYCFVVDIVVISEGRVALPTQHLVSDVVSTCVGLFFCYVGYFVKNEVHVHNGIQEPLLNGDPLESKKTKGGDTVTPFSYAGILSILTFSWVGPLIAVGNKKTLDLEDVPQLDSRDSVAGAFPSFRDKLEADCGSINSVTTLKLVKLLLMSAWKEILFTALLALLNTLASYVGPYLIDGFVQYLDGQRLYENQGYALVSAFFFAKLVECLTQRHWYFRLQQIGLRIRALLVTMIYNKALTLSCQSKQGHTSGEIINFMTVDAERVGIFSWYLHDLWMVALQVTLALLILYKNLGLASIAALVATVVIMLANVPLGSLQEKFQKKLMESKDARMKATSEVLRNMRILKLQGWEMKFLSKITELRKTEQGWLKKYVYTAAMTMFVFWGSPTFVSVVTFGTCMLIGIPLESGKILSALATFRILQEPIYSLPDTISMIAQTKVSLDRIVSYLRLDDLQSDVVEKLPWGSSDAAIEVVDGKFSWDLSSPNPTLRNINLKVFHGMKVAVCGTVGSGKSTLLSCVLGEVPKISGILKICGTKAYVAQSPWIQSGKIEDNILFGECMDRERYEKVLEACSLKKDLETLSFGDQTIIGERGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYTELLNNSGADFMELVGAHKKALSTLDSLDGATVSDEISALEQDVNVSDTHGFKEDASKDEQNGKTDNKSESQGQLVQEEEREKGKVGFSVYWKCITTAYGGALVPFILLAQILFQALQIGSNYWMAWATPISADVEPPVEGTTLIVVYVGLAIGSSFCILARAMLLVTAGYKTATILFNKMHFCIFHAPMSFFDSTPSGRILNRASTDQSALDTDIPYQIASFAFILIQLLGIIAVMSQAAWQVFIVFIPVIAISIWYQQYYIPSARELSRLVGVCKAPIIQHFAETISGTSTIRSFDQQSRFQESNMKLSDGYSRPKFNIAGAMEWLCFRLDMLSLITFAFSLTFLISIPQGVIDPGLAGLAVTYGLNLNMIQAWMIWNLCNMENKIISVERILQYTCIPSEPLLIVDENRPDPSWPSYGEVDIQDLQVRYAPHLPLVLRGLTCKFRGGLKTGIVGRTGSGKTTLIQTIFRIVEPTAGQIMIDRINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALEKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTTTDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLLENKSSSFAQLVAEYTMRSNSSFEKSDDQ 1492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2576 1492 SUPERFAMILY ABC transporter transmembrane region 291 591 IPR036640 GO:0005524|GO:0016021
Aed3g2576 1492 ProSitePatterns ABC transporters family signature. 737 751 IPR017871 GO:0005524
Aed3g2576 1492 Gene3D - 1225 1478 IPR027417 -
Aed3g2576 1492 Gene3D - 596 847 IPR027417 -
Aed3g2576 1492 SUPERFAMILY ABC transporter transmembrane region 924 1222 IPR036640 GO:0005524|GO:0016021
Aed3g2576 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 612 835 IPR003439 GO:0005524
Aed3g2576 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 297 578 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed3g2576 1492 Pfam ABC transporter 630 764 IPR003439 GO:0005524
Aed3g2576 1492 Pfam ABC transporter transmembrane region 925 1167 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed3g2576 1492 Pfam ABC transporter transmembrane region 299 565 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed3g2576 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 827 IPR027417 -
Aed3g2576 1492 CDD ABCC_MRP_domain1 612 812 - -
Aed3g2576 1492 MobiDBLite consensus disorder prediction 869 899 - -
Aed3g2576 1492 CDD ABC_6TM_ABCC_D2 923 1217 IPR044726 GO:0140359
Aed3g2576 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 925 1205 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed3g2576 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1242 1476 IPR003439 GO:0005524
Aed3g2576 1492 Pfam ABC transporter 1260 1407 IPR003439 GO:0005524
Aed3g2576 1492 Gene3D ABC transporter type 1, transmembrane domain 884 1223 IPR036640 GO:0005524|GO:0016021
Aed3g2576 1492 Gene3D ABC transporter type 1, transmembrane domain 277 594 IPR036640 GO:0005524|GO:0016021
Aed3g2576 1492 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 84 1488 - -
Aed3g2576 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1234 1473 IPR027417 -
Aed3g2576 1492 CDD ABC_6TM_ABCC_D1 311 586 IPR044746 GO:0140359
Aed3g2576 1492 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 84 1488 - -
Aed3g2576 1492 SMART AAA_5 1268 1461 IPR003593 -
Aed3g2576 1492 SMART AAA_5 639 812 IPR003593 -
Aed3g2576 1492 MobiDBLite consensus disorder prediction 869 885 - -
Aed3g2576 1492 CDD ABCC_MRP_domain2 1240 1460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2576 Aed-Chr3 27882733 27889126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2576 612 843 Calmodulin-binding Proteins AT2G36910 29.084 9.23e-22 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2576 3 27882733 27889126 Aed4g2407 4 26312220 26318213 PCT