Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2572 ATGGCTGCTGTTATGCCTCTCTATCCTTATAATCCATTGCTGTACGTTTCAACTCCTTCGAGTTTTCGTTCTCAATTTTGGATTTTGGAGAGAGGGCGTTTGGGTTCTGCAAGGTTGAAGAATTTGGAGGAGTTTGCTGAGCCTGCTGACTTAGATGTTAATAACAACAAGAGATTTAAGTCAAAGAAAACTAAAGGAAAAGATAGAGAACAGGAGTGGGGTTTAAGATCTTTTGACAATGAACAAAGCATTAGATTGCCTAGAAGTGAGAGAGTGGCATCCTTACAACGAAATGAGAGCGGAAAGCATAGTAGAAATGTAAAGGATGAAAAATATCCGCGGTTGTCCGAAGAGATTCCTTTGGATGTGAAATGGTTACCCCTTCTTGATTACTTAAGCACTTTTGGAATGAAGGAATCACACTTTGTCCAAATGTATGAGAGACACATGCAATCACTTCAAATTAATGTGTCTTCCGCACAGGAAAGGTTAGAATACTTATTGAGTATTGGTGTTAAACATAGAGATGTAAGAAGAATCCTTTTGAGGCAGCCACAAATTCTTGAGTATACAGTGGAGAACAATTTGAAGTCTCGTGTTGCTTTCTTGAGGGGCCTGGGCATACCTAATTCTAGAATAGGGCAAATCATTGCTGCTGCTCCATCCTTGTTTTCATATAGTGTTGAGAATTCGTTAAAACCAACAGTTAGATATTTAATTGAGGAAGTTGGCATCAAGGAAAAAGATTTGGGTAAGGTCATTCAGCTTAGTCCCCAAATTCTTGTGCAGAGAATTGACATTTCATGGAATACTCGTTATATGTTTCTTACCAAAGAATTGGGTGCACCCAGAGATAGCATTGTGAAGATGGTGAAAAAACATCCCCAACTTCTCCATTACAGCATAGATGATGGATTACTTCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAATTCAGACATTGTGAAAGTTGTGACTAGCCTTACACAGGTGCTATCTCTGTCTTTGGAGGAGAATCTAAAGCCCAAATATTTGTACTTGGTTAATGAACTTAACAATGAGGTGCAGTCCTTGACCAAATACCCGATGTATCTTAGCTTATCTTTAGACCAGAGAATTCGTCCTCGTCATAGGTTCTTGGTTTCCCTAAAGAAAGCTCCAAAAGGACCATTTCCACTTGGATCTCTAGTTCCAACTGATGAATGTTTTTGCCAACAGTGGGCAGGAACTAGTTTGGATAAATATTTGGCATTTCGTCAGAGATTATTACTTAAAAAGTTTGCTGAGAAATATGAAAGAAAAATGTGA 1314 0.3836 MAAVMPLYPYNPLLYVSTPSSFRSQFWILERGRLGSARLKNLEEFAEPADLDVNNNKRFKSKKTKGKDREQEWGLRSFDNEQSIRLPRSERVASLQRNESGKHSRNVKDEKYPRLSEEIPLDVKWLPLLDYLSTFGMKESHFVQMYERHMQSLQINVSSAQERLEYLLSIGVKHRDVRRILLRQPQILEYTVENNLKSRVAFLRGLGIPNSRIGQIIAAAPSLFSYSVENSLKPTVRYLIEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRYMFLTKELGAPRDSIVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNSDIVKVVTSLTQVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLLKKFAEKYERKM 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2572 437 PANTHER CGI-12 PROTEIN-RELATED 59 429 IPR003690 GO:0003690|GO:0006355
Aed3g2572 437 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Aed3g2572 437 SMART mt_12 251 283 IPR003690 GO:0003690|GO:0006355
Aed3g2572 437 SMART mt_12 143 173 IPR003690 GO:0003690|GO:0006355
Aed3g2572 437 SMART mt_12 357 388 IPR003690 GO:0003690|GO:0006355
Aed3g2572 437 SMART mt_12 324 356 IPR003690 GO:0003690|GO:0006355
Aed3g2572 437 SMART mt_12 214 246 IPR003690 GO:0003690|GO:0006355
Aed3g2572 437 SMART mt_12 288 319 IPR003690 GO:0003690|GO:0006355
Aed3g2572 437 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 59 429 - -
Aed3g2572 437 MobiDBLite consensus disorder prediction 90 111 - -
Aed3g2572 437 Gene3D Transcription termination factor 3, mitochondrial 186 424 IPR038538 -
Aed3g2572 437 Coils Coil 143 163 - -
Aed3g2572 437 MobiDBLite consensus disorder prediction 95 111 - -
Aed3g2572 437 Pfam mTERF 192 384 IPR003690 GO:0003690|GO:0006355
Aed3g2572 437 Pfam mTERF 129 203 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed3g2572 mTERF 1.1e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2572 K15032 - gmx:100809638 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2572 3 27858233 27861060 Aed3g2572 3 27858233 27861060 ECH