Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2564 ATGCAGAACACAAGAGATTTTGCTGTGTTTCTAAAGAGTCTAGTTTCCTTTGCTATCCTTCTTTTCTTTACCATAGAATGTACAAAATGTGAGTTATCAGAATCTGAGTCTTTCTTCAATTTCCTAATGGCCCTTGATCCCGAAAACGTGCTTAACATTACCCGGATTGAGTCACCATCACATCCATGCTTGGTCAAGTTGAATGGTGTGAGATGCAACTCAAATGCTACCAATATTGTACATATAAGGCTTGAGAACTTGAACCTTAGTGGCACAATCGATGCAGATTCCCTATGCAGGCTCCAAAAGTTAAGAGTGGTAAGCTTGGCTAACAACAACGTTAGAGGAACTATTCCACACTCAATTTTGCATTGTACAAGGTTGACACATTTAAATGTAACCAGCAACCAACTGAGTGGGAGGTTGCCAACTGCCTTGACAAAATTGAAACATCTTAGGAACTTGGACATTTCTGATAACAACTTTTCTGGTATGATACCTAGTAAACAACAATATAGACACCTATTGACTTATAATTATTATGTGAGTCCAAGTAAAAGTGACACAGACACAATGCAGCAGCAACCAACCTCAGCTCCTTCAAGTGACAGCAGCACAGCTAATAATGGCAAGAAACCATGGTCTTCGAAGGAAGGAACATTGGGGGTGTTACTTTTGGGCGCTGGATTGCTTATGTCAACCATTTACTTTATTGTAAAGAAGTCAGCAAAGTTGAGTGCAGAGGGACGAAGAGAGGTAGAAGTTAATAAAGACCATCGTCGTGTGTCTCCAATAAAAATTGCTACAACAACTCATGAAGAAGTTCAAGAGGTGATTAAGCTAAAGGAAGGAGATTCTGAGCTTATTTTCTTTGTTGAAGATCGTGAAAGGTTCACACTCGAGGACCTTCTTCGAGCCACTGCTGACTTGAGGAATGAAGGCTTTTGCAGCAGCCTTTACAAGGTGAAACTGGAGAACAATGTCCACTATGCAGTCAAAAGATTGAAGAATTTGCAGGTTTCCTTGGAGGAGTTTGGTGAAACATTAAGGAAGATAAGTAACTTGAAGCATCAGAATATCCTCCCCCTTGTTGGTTACCGCTCTACCAGTGAAGAAAAACTCATCATCTACAAATATCAAAGCAATGGAAGCCTGCTTAATCTATTAAACGGTAGAAAAGAATTCCCATGGAAACTGCGTTTGAACATAGCATGTGGGATTGCAAGGGGTTTGGCCTTCATATATAGGAGGAAGTTGGATGGAGATGAGGATTTGGTAATTCCTCATGGGAATCTGAAGCCATCAAACATCCTTCTTGATGAGAAGAATGAGGCAGTAATAAGTGAGCATGAGGTTAGGGAAAATGATCATCAATGGGCATTTCCCCTTCTCAACATTGCCCTTTCTTGTGTCTCACGTTTCCAAGAAAATAGGCCAACCACTGTGGAGATTTTGGAGAAGATTGAGGAGGTCATGGATCAACATGAACAACATCAGGAACGTTGGGCTAACAAATGCTGTTCCAATGGATCCAACCGTGATGAATACAACAAGCAAAAGCAGAGAGGTGTTGGAATAAGTATGAATAATGAAAAGCATGACATGCGTTTGAAACTCGTTTGGGTTGATTTTTCAAAAGCAAAAAGCAAAGAGCGTGTGCGGATGATAATCACTGCTACAAAAAGGCAAAGCAATGAAATAATGATAACTTTAGGATACCAAACTTCTGAAAAGCAACTAGATAACCAAAATATGAAAATTGAAGATTGTGTAATTGTAAAGGGTGTTTATTTAGGAGACAGTGCTCTAGGAAAACCACTGCTGAGATCTAAGTTGAGTAGCATCGAAGGCTTCAAAATCCTAAGGCCAAAATCGGGTTTTCCTCTTGGTCTTGGCAGTGTTGATTCACCACTTAAATTAAATGTGCTTACGATTTTGAATGTCTCATGTTAG 1953 0.3984 MQNTRDFAVFLKSLVSFAILLFFTIECTKCELSESESFFNFLMALDPENVLNITRIESPSHPCLVKLNGVRCNSNATNIVHIRLENLNLSGTIDADSLCRLQKLRVVSLANNNVRGTIPHSILHCTRLTHLNVTSNQLSGRLPTALTKLKHLRNLDISDNNFSGMIPSKQQYRHLLTYNYYVSPSKSDTDTMQQQPTSAPSSDSSTANNGKKPWSSKEGTLGVLLLGAGLLMSTIYFIVKKSAKLSAEGRREVEVNKDHRRVSPIKIATTTHEEVQEVIKLKEGDSELIFFVEDRERFTLEDLLRATADLRNEGFCSSLYKVKLENNVHYAVKRLKNLQVSLEEFGETLRKISNLKHQNILPLVGYRSTSEEKLIIYKYQSNGSLLNLLNGRKEFPWKLRLNIACGIARGLAFIYRRKLDGDEDLVIPHGNLKPSNILLDEKNEAVISEHEVRENDHQWAFPLLNIALSCVSRFQENRPTTVEILEKIEEVMDQHEQHQERWANKCCSNGSNRDEYNKQKQRGVGISMNNEKHDMRLKLVWVDFSKAKSKERVRMIITATKRQSNEIMITLGYQTSEKQLDNQNMKIEDCVIVKGVYLGDSALGKPLLRSKLSSIEGFKILRPKSGFPLGLGSVDSPLKLNVLTILNVSC 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2564 650 PANTHER OS05G0588300 PROTEIN 450 511 - -
Aed3g2564 650 SUPERFAMILY L domain-like 63 169 - -
Aed3g2564 650 Coils Coil 485 505 - -
Aed3g2564 650 MobiDBLite consensus disorder prediction 186 214 - -
Aed3g2564 650 Gene3D Ribonuclease Inhibitor 37 197 IPR032675 -
Aed3g2564 650 PANTHER OS05G0588300 PROTEIN 16 450 - -
Aed3g2564 650 Gene3D Transferase(Phosphotransferase) domain 1 381 453 - -
Aed3g2564 650 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Aed3g2564 650 SUPERFAMILY Protein kinase-like (PK-like) 298 448 IPR011009 -
Aed3g2564 650 PANTHER TYROSINE KINASE FAMILY PROTEIN 450 511 - -
Aed3g2564 650 PANTHER TYROSINE KINASE FAMILY PROTEIN 16 450 - -
Aed3g2564 650 Pfam Protein kinase domain 314 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2564 650 SMART tyrkin_6 298 488 IPR020635 GO:0004713|GO:0006468
Aed3g2564 650 Gene3D Phosphorylase Kinase; domain 1 269 379 - -
Aed3g2564 650 ProSiteProfiles Protein kinase domain profile. 275 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2564 Aed-Chr3 27823502 27826438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2564 14 448 Receptor kinase-like Gene Family AT5G53320 29.122 2.02e-42 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed3g2564 Pkinase 2.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2564 - - gmx:100807491 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2564 3 27823502 27826438 Aed3g2564 3 27823502 27826438 ECH