Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2553 ATGCGAATGCGAGGTGATCAAATAAAATCCACAGTTGAGAAGCTTCAGATCAGATTAAGATCCGATATGGGATTTTCGGTAACCACGCTAGTTTTCGCAGTGATTGGAATTGTGGCGTCCCTTTGTACCAGAATTTGTTTCAACAGAGGACCTTCCGCTAATCTATTTCACTTAACTTTGGTTCTTACTGCAACAATATGCTGCTGGATGATGTGGGCGATTGTATATCTGGCACAGATGAAACCCCTCATAGTACCTATCCTCAGTGAGGGTGAATAA 279 0.4229 MRMRGDQIKSTVEKLQIRLRSDMGFSVTTLVFAVIGIVASLCTRICFNRGPSANLFHLTLVLTATICCWMMWAIVYLAQMKPLIVPILSEGE 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2553 92 Pfam ATP synthase subunit H 25 89 IPR008389 GO:0033179|GO:0046961|GO:1902600
Aed3g2553 92 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 23 92 - -
Aed3g2553 92 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 23 92 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2553 Aed-Chr3 27751919 27754169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2553 23 92 Primary Pumps ATPases(2) AT4G26710 78.571 1.47e-39 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2553 K02153 - gmx:100798558 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2553 3 27751919 27754169 Aed3g2553 3 27751919 27754169 ECH