Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2550 ATGTCATCAGACTTGGACAGGCAAATAGAGCAGTTGAAGAGATGTGAGCCTCTTAAGGAGTCTGAAGTGAAGGCTCTTTGCCTGAAAGCCATGGAAATCCTCGTCGAAGAGAGCAACGTTCAAAGGGTCGACGCCCCTGTCACCATATGTGGTGATATTCACGGTCAGTTCTATGACATGAAGGAGCTTTTCAAAGTAGGAGGGGATTGCCCCAAAACTAACTATTTGTTCCTGGGGGATTTTGTTGATAGAGGATTTTACTCGGTTGAAACGTTTCTGCTTCTGCTCGCTCTTAAGGTATATGGATTCTATGATGAGTGCCTTCGAAAATATGGTTCAGTCAATGTCTGGAGATATTGTACGGATATATTCGACTACTTAAGCTTGTCCGCCCTAATTGAAAACAAGATTTTCAGTGTTCATGGTGGCCTTTCTCCTGCCATTTCAACACTGGATCAGATACGAACTATTGATCGGAAGCAAGAAGTACCTCATGATGGTGCCATGTGTGACCTCCTATGGTCAGATCCTGAAGATATTGTGGATGGATGGGGTCTTAGTCCACGTGGTGCTGGTTTCTTATTTGGTGGCAGTGTTGTTACTTCATTTAACCACTCCAATAACATTGACTATATATGCCGTGCACATCAGTTGGTAATGGAAGGATATAAATGGATGTTCAATAACCAGATAGTTACGGTCTGGTCAGCTCCAAATTATTGCTACAGATGTGGTAATGTAGCTGCAATTCTGGAGTTGGATGGAAATCTTAATAAGCAGTTCCGGGTGTTTGAGGCTGCTCCACAGGAATCAAGAGGGACACCTGCCAAGAAACCAGCACCAGATTACTTTCTATGA 858 0.4347 MSSDLDRQIEQLKRCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDGNLNKQFRVFEAAPQESRGTPAKKPAPDYFL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2550 285 Gene3D - 1 285 IPR029052 -
Aed3g2550 285 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP-X ISOZYME 1 99 285 - -
Aed3g2550 285 SMART pp2a_7 18 268 IPR006186 GO:0016787
Aed3g2550 285 SUPERFAMILY Metallo-dependent phosphatases 3 272 IPR029052 -
Aed3g2550 285 CDD MPP_PP2A_PP4_PP6 4 268 - -
Aed3g2550 285 Pfam Calcineurin-like phosphoesterase 46 217 IPR004843 GO:0016787
Aed3g2550 285 PRINTS Serine/threonine phosphatase family signature 46 73 IPR006186 GO:0016787
Aed3g2550 285 PRINTS Serine/threonine phosphatase family signature 208 228 IPR006186 GO:0016787
Aed3g2550 285 PRINTS Serine/threonine phosphatase family signature 230 246 IPR006186 GO:0016787
Aed3g2550 285 PRINTS Serine/threonine phosphatase family signature 151 178 IPR006186 GO:0016787
Aed3g2550 285 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 3 100 - -
Aed3g2550 285 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 99 285 - -
Aed3g2550 285 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP-X ISOZYME 1 3 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2550 Aed-Chr3 27739841 27745250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2550 25 203 Calmodulin-binding Proteins AT5G63870 32.231 3.51e-23 94.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2550 3 27739841 27745250 Aed3g2550 3 27739841 27745250 ECH