Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2530 ATGTCGGCGTCGGAGATTCTTCGGGAACTGGATACATTGAAGGACGCAAAGACCAAAATTGAGCACAAAATATCTGTGCTTGAAGCTCAACTCAGAGAGATTAATCTCCAAAACGACGCCGCACCACCCAATGGTTCTTTATCGTACCCTACCAACGGATTAACGCAGGACATGATTCACAGATACAGTCGCCACCTCGTGCTTCCTTCCTTTGGGGTTCAAGGGCAGGCAAATCTGTTGAAGTCGTCAATTTTAGTTGTGGGAGCTGGAGGATTGGGTGCTCCTGCATTGTTATACTTAGCAGCTTCTGGTGTTGGGCGCTTGGGTGTTATTGATCATGACGTGGTTGAGCTGAATAATATGCATAGGCAGGTTATCCACACAGAAGCATATGTCGGTAAGCCGAAAGTGAAATCTGCTGCTGCTGCTTGTCACTCGATCAACTCCACTATTCAAGTTGTGGAACATGAAGAAGCTTTGCGGACTTCCAACGCTTTGGAAACTCTCAGCAAATATGATATAATAGTAGATGCAACAGATAATGCTCCTACCCGGTACTTGATCAGTGATTGCTGTGTGGTTCTAGGAAAGCCACTTGTGTCAGGTGCTGCACTGGGATTGGAAGGGCAGCTTACTATCTACAATTACAATGGTGGTCCTTGCTATCGATGCCTCTTTCCAACTCCACCACCTAGAACAGCATGTCAAAGTTGTGCAGAGGGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGCTGTTTCCAAGCTCTTGAGGCTATTAAGATTGCAGCTTCTGTTGGTGAACCACTCTCAGGAAGGATGCTTCTCTTGGATGCATTGTCTGGACGGATTCGTATTGTCAAAATTAGAGGAAGATCTATGCAGTGTGAAGCTTGTGGAGAAAATGCAGCATTTACCCAGCAGCAGTTCCGAGAATTTGATTATGAGAAGTTCACACATACTCCCTTGCGTGTGCCTCCTTTGAAGTTAAATCTACTTCCCAGTGAATCAAGAATCAGCAGCAAAGAGTACAGTGAAGTAATTCTTAAGAAGGAGCCACACGTGCTTGTTGATGTTAGACCAGGTCACCATTTCAAGATTGTATCTATACCAAAGTCCCTGAACATTCCACTCTCAACGTTAGAGGCAAGGCTTCCTGAAATATCATCAGCTTTGAAGAAAGAGGAAGAGGACAGTGGTGTAGTTTCTGGGTCAAGTGCACAATTGTATGTAGTTTGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTGTCTTCACAAAATGGGTTTCACTTCTGCCAAGGATATTGTTGGGGGCTTAGAGTCTTGGGCCCACAATGTGGACCCTAAGTTCCCTACATATTAA 1368 0.4496 MSASEILRELDTLKDAKTKIEHKISVLEAQLREINLQNDAAPPNGSLSYPTNGLTQDMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYLAASGVGRLGVIDHDVVELNNMHRQVIHTEAYVGKPKVKSAAAACHSINSTIQVVEHEEALRTSNALETLSKYDIIVDATDNAPTRYLISDCCVVLGKPLVSGAALGLEGQLTIYNYNGGPCYRCLFPTPPPRTACQSCAEGGVLGVVPGIIGCFQALEAIKIAASVGEPLSGRMLLLDALSGRIRIVKIRGRSMQCEACGENAAFTQQQFREFDYEKFTHTPLRVPPLKLNLLPSESRISSKEYSEVILKKEPHVLVDVRPGHHFKIVSIPKSLNIPLSTLEARLPEISSALKKEEEDSGVVSGSSAQLYVVCRRGNDSQRAVQCLHKMGFTSAKDIVGGLESWAHNVDPKFPTY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2530 455 Coils Coil 3 37 - -
Aed3g2530 455 Gene3D - 55 306 - -
Aed3g2530 455 Coils Coil 378 398 - -
Aed3g2530 455 ProSiteProfiles Rhodanese domain profile. 350 453 IPR001763 -
Aed3g2530 455 Pfam Rhodanese-like domain 348 445 IPR001763 -
Aed3g2530 455 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 49 422 IPR035985 GO:0008641
Aed3g2530 455 PANTHER ADENYLYLTRANSFERASE AND SULFURTRANSFERASE MOCS3 3 441 - -
Aed3g2530 455 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 27 455 IPR028885 GO:0002143|GO:0004792|GO:0005829
Aed3g2530 455 Gene3D - 337 455 IPR036873 -
Aed3g2530 455 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 3 441 IPR045886 -
Aed3g2530 455 CDD ThiF_MoeB_HesA_family 61 289 - -
Aed3g2530 455 Pfam ThiF family 62 297 IPR000594 -
Aed3g2530 455 SMART rhod_4 340 450 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2530 105 455 Sulfurtransferasese or Rhodanese AT5G55130 71.591 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2530 K11996 - gmx:100814736 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2530 3 27621199 27626959 Aed3g2530 3 27621199 27626959 ECH