Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2523 ATGGCGAATTTGCCCCAATCCATCTCCATAAGCGGCGCGTCGTTTGGAGCTCCTTCTCCCTCTGCTACCGAGGATCGCAGGATGGCGTCTGTCGAACAACTCGTTCTCGAACTCAGCAACCCCGATCTTCGAGAAAACGCTCTTCATGAACTCTCCAAGAAGAGAGAGTTATTTCAGGATCTTGCTCCATTATTGTGGAATTCTTTTGGTACCATGGCAGCACTTTTACAGGAGATAGTTTCAATATACCCTGTTATTTCACCTCCAAACCTTACTCCAGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCATCTCACCTTAATACAAGGATGCAATTCCTCAATGCTCATATACCACTATATCTGTATCCCTTCCTTAATACAACAAGTAAGTCCAGACCATTTGAGTATTTGAGGCTTACCAGTCTTGGGGTCATTGGTGCCTTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACAGAGATTATTCCGCTGTGCCTGCGCAGTATGGAGATGGGCAGTGAATTGTCAAAAACGGTTGAGTTTGCTGATCTTGTTTTAGCCCAATTTGTTCCATCACTGCAGGTTGCAACCTTTATAGTTCAAAAAATTCTGTTGGACGAAATTGGTTTGAAATATATTTGCACAACAGCAGAGCGCTTTTATGCAGTAGGTCGAGTTTTGGGAAACATGGTGGCAACTCTTGTTGAGCAACCTTCATGTCGTCTTTTGAAGCACATTATTCGTTGTTATCTTCGTCTGTCAGATAATCAGAGTGCTTGTGAGGCATTAAGAACCTGTCTTCCAGAAATGTTAAGAGATGCTACATTCAGTAGTTGTCTTCGGGAAGACCCAACAGCTAGGAGGTGGCTACAGCAGTTGCTTCATAATATTGGAGTCAATCGGGTTCTGCCCTTCAAGGTGGAGGAGGATTCGATCATATGA 975 0.4359 MANLPQSISISGASFGAPSPSATEDRRMASVEQLVLELSNPDLRENALHELSKKRELFQDLAPLLWNSFGTMAALLQEIVSIYPVISPPNLTPAQSNRVCNALALLQCVASHLNTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRSMEMGSELSKTVEFADLVLAQFVPSLQVATFIVQKILLDEIGLKYICTTAERFYAVGRVLGNMVATLVEQPSCRLLKHIIRCYLRLSDNQSACEALRTCLPEMLRDATFSSCLREDPTARRWLQQLLHNIGVNRVLPFKVEEDSII 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2523 324 PANTHER UNCHARACTERIZED 1 313 - -
Aed3g2523 324 Pfam Cell differentiation family, Rcd1-like 34 308 - -
Aed3g2523 324 Gene3D - 23 309 IPR011989 -
Aed3g2523 324 PANTHER BNAA05G20110D PROTEIN 1 313 - -
Aed3g2523 324 SUPERFAMILY ARM repeat 36 291 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2523 Aed-Chr3 27576439 27580152 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Aed3g2523 Rcd1 7.3e-121 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2523 K12606 - gmx:100801266 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2463 4 26770930 26780398 Aed3g2523 3 27576439 27580152 PCT