Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2501 ATGGGAATGGAAGGAGGAAAGAAAGAATTTGGGAATGGAGTGGAGAAAATGGGAAAGAAGATCATTCTCAAAAGAAAAGCCGAAAGAGGAGAAGATAATCATAAGCCGCTGCTGTCAAAGAGAGTCAAAAGAGAAGATGAAGAAGTGGAAGCGAATACTAGTCGTCTTCCACAACATGGTAAATCCAAATTTGAATATCTACTTGATGCAGTGTCATTATTTACTGCGTATGAAAAGGAAAAGGAACGTGAGCGTGAACGTGAACGTGAGCGTGAGCGTGAACGTGTACATGATGATGAGCAACAGCAAGAGCAAGGGCACCCTGATGATGAAGAAGAAATAATATTGCCAAAGGAATTTGAAGAAAAGATAAAAGAATTGAATGGAAGCGAGGTGAAGTTTGTGATGCAGAAGAGGCTTTATAGGACAGACGTGAACCCACACCAAGCTCGCTTGTCTATTGCACCCAAAAAGATTTCCAACAAATTTCTGACAGAAGCTGAGGAGTTTTCCTTAGACGAGGCTAATAAAAAAACAAAAAGTTGCAGTAATGGCCTAAACAGATCAAAGCCTCCTTCTGGCATGGCCGTGAAGATGGTGTTGGATCCTTCTCTGAGAGAGTGCAACGACATGCGCTTCAAGAAGTGGGTAATGACCAGAAGCCCCACCTACAACTTGACCCAAGGATGGAACAAGATTGTAGAACACAACAATCTCAAATTTGGTCATATGCTGCAAATCTGGTCCTTCAGAATCTCTTCTCACCTCTGTTTCGCACTAGTCAATAAGAAGATCTGA 798 0.4198 MGMEGGKKEFGNGVEKMGKKIILKRKAERGEDNHKPLLSKRVKREDEEVEANTSRLPQHGKSKFEYLLDAVSLFTAYEKEKERERERERERERERVHDDEQQQEQGHPDDEEEIILPKEFEEKIKELNGSEVKFVMQKRLYRTDVNPHQARLSIAPKKISNKFLTEAEEFSLDEANKKTKSCSNGLNRSKPPSGMAVKMVLDPSLRECNDMRFKKWVMTRSPTYNLTQGWNKIVEHNNLKFGHMLQIWSFRISSHLCFALVNKKI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2501 265 PANTHER DUF313 DOMAIN PROTEIN 59 262 - -
Aed3g2501 265 MobiDBLite consensus disorder prediction 78 115 - -
Aed3g2501 265 SUPERFAMILY DNA-binding pseudobarrel domain 136 261 IPR015300 -
Aed3g2501 265 MobiDBLite consensus disorder prediction 24 61 - -
Aed3g2501 265 Coils Coil 74 94 - -
Aed3g2501 265 Gene3D - 125 264 IPR015300 -
Aed3g2501 265 MobiDBLite consensus disorder prediction 24 54 - -
Aed3g2501 265 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 59 262 IPR005508 GO:0003677
Aed3g2501 265 Pfam B3 domain-containing protein At2g31720-like 123 235 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2501 Aed-Chr3 27477676 27478473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2501 124 260 B3 DNA Binding Superfamily AT1G05930 28.873 7.19e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2501 - - gmx:102667627 197.978