Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2491 ATGAGTGGAGTGGGGATTGATATTGGAAATGAGAACTGTGTGATTGCTGCAGTGAAGCAGGGTGGTATTGATGTTTTGTTGAATGATGAATCCAAACGTGAAACCCCTGCTGTGGTGTGTTTTGGAGAGAAGCAACGGTTTGTAGGGTCAGCTGGTGCTGTTTCTGCTATGATGCACCCTAAGTCCACAATATCTCAAGTGAAAAGACTAATAGGCAGGAGATTTGCAGATCCTGATGTTCAAAATGAGTTAAAAATGCTCCCTGTTGAAACATTGAAAGGCCCAGATGGTGGCATTCTGATTCACTTGAAATACTTGAATGAGGCTCATGTGTTTACCCCAGTTCAAATAGTAGCAATGCTGTTTGCTCACTTGAAGACTATAGCTGGAAAGGATTTTGGGACCACAATTTATGATTGTGTTATTGGGGTTCCATCATACTTTACCAACTTGCAGAGACAAGCATATCTTGATGCAGCAGCAATTGTTGGGTTGAAGCCTTTGAGGTTGATCCATGATTGCACTGCAACTGGTCTTAGTTATGGAGTTTACAAAACAGATTTTCTCAGTGGTGCAGCTCCTATTTATGTTGCATTTGTTGACATAGGTCATTGTGATACTCAGGTCTCTATTGCAGCATTTCAGGCTGGTCAAATGAAGATACTTTCACATGCTTTTGACATGAGCTTAGGGGGGAGAGACTTTGACAAGGTTCTGTTTAGTCATTTTGCAGCAAAATTTAAGGAACAGTACAGCATTGACGTGTATTGCAATGCCAGGGCATGTAGGAGATTGCGTGTAGCATGTGAGAAGTTGAAGAGGGTTTTGAGTGCAAATGCAGAGGCTGATCTGAGCATTGACTGTTTGATGGATGAAAAGGATGTTAAGGGCTTTATCAAGAGGGAAGAATTTGAGAATTTGGCATCAGGATTATTGGAGAGATTTAATATTCCCTGCAACAAAGCATTGGCTGATGCCGGCATGACTGTAGAAAAGATTAATTATGTTGAGTTAGTTGGGTCAGGTTCACGGATTCCAGCCATAAATAAATTATTAACTTCTCTATTTAAGAGAGAACTCAGCCACATGCTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTCCAGTGTGCAATGCTCAGTCCTGTTTTCCATGTCAAAGAATACGAGGTCCAGGATATTATTCCTTTTACCATCGGACTTTCTTCTGATGGAGATCCAATTTGTGCAGGATCAGATGGTGTACTCTTTCCAAAAGGCCAACCCATTCCAAGTGTTAAAATTCTAACATTTCAGTACTGTGATTTGCTCCGCCTGGAAGCATTCTATGCTAATCCAGATGAATTACCACCCGGAACATCTCCTAAAATTAGTTGCTTCACAATTGGTCCTTTCCATGGATCCCATGGAAGTAACGCGAGAATTAAAGTTCAATTTCAACTAAATTTGCATGGCATTATCAGTATTGAATCAACTACATTGGTCAAGGATCATGTGGATGATTCAGTCACAACAGGTGACTATCATTCAAATTCCGAAGCAATCAATGTTAAACCTGTTTCTGAGACAATTGAAAATGTCACAGAAGATAGTATCAATAAAAAGTGTGAAGATCCACATCATTCTGCTGATGGTACAAAAGAAGATAAAGCTAACAGAAGGCTTCATGTACCAGTGAGTGAAAACATATATGGTGGAATGACCAAGGCTGAGATCTTGGAAGCTCAAGAAAAAGAACTCCAGTTAGCCGATCAGGACAGAAGAATTGAGCTAACCAAAGACAAGAAGAATTCGTTGGAGTCTTATATTTATGAAACGAGGAGTAAGCTCTTTAGCACATATCTAAGGTTTTCAAGCGAACATGAGAGGAAGGAGATATCTAGGAGCCTGAAAACAACTGAGGATTGGCTTTATGATGATGGTGATGATGAAACTGTAGATGCTTATTCTTCAAAACTAGAAGATCTAAAACAGCTGGTGGATCCAATTGAGTTTCGATATAGAGACAATGAAGCAAGACCACAAGCTACAAGAGATTTGTTAAGTTGCATTGTAGAGTATCGAATGTCTGCAGATTCTGTTCCACCCCAACATAAAGAACAGATCCTCAATGAGTGCAATAAAGCAGAGCTGTGGCTAAGAGAGATGAGGCAGCAGCAAGATCTTTACCCTAAGAACTTTGATCCAGTATTATTGTCAAGTGATATCAAGAGCAAGACACAAGAGTTAAACTCAGTATGCCAACAGATATTTGAAATCTATGGGTGA 2271 0.4016 MSGVGIDIGNENCVIAAVKQGGIDVLLNDESKRETPAVVCFGEKQRFVGSAGAVSAMMHPKSTISQVKRLIGRRFADPDVQNELKMLPVETLKGPDGGILIHLKYLNEAHVFTPVQIVAMLFAHLKTIAGKDFGTTIYDCVIGVPSYFTNLQRQAYLDAAAIVGLKPLRLIHDCTATGLSYGVYKTDFLSGAAPIYVAFVDIGHCDTQVSIAAFQAGQMKILSHAFDMSLGGRDFDKVLFSHFAAKFKEQYSIDVYCNARACRRLRVACEKLKRVLSANAEADLSIDCLMDEKDVKGFIKREEFENLASGLLERFNIPCNKALADAGMTVEKINYVELVGSGSRIPAINKLLTSLFKRELSHMLNASECVARGCALQCAMLSPVFHVKEYEVQDIIPFTIGLSSDGDPICAGSDGVLFPKGQPIPSVKILTFQYCDLLRLEAFYANPDELPPGTSPKISCFTIGPFHGSHGSNARIKVQFQLNLHGIISIESTTLVKDHVDDSVTTGDYHSNSEAINVKPVSETIENVTEDSINKKCEDPHHSADGTKEDKANRRLHVPVSENIYGGMTKAEILEAQEKELQLADQDRRIELTKDKKNSLESYIYETRSKLFSTYLRFSSEHERKEISRSLKTTEDWLYDDGDDETVDAYSSKLEDLKQLVDPIEFRYRDNEARPQATRDLLSCIVEYRMSADSVPPQHKEQILNECNKAELWLREMRQQQDLYPKNFDPVLLSSDIKSKTQELNSVCQQIFEIYG 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2491 756 Gene3D Actin; Chain A, domain 4 231 314 - -
Aed3g2491 756 SUPERFAMILY Actin-like ATPase domain 3 185 IPR043129 -
Aed3g2491 756 Coils Coil 576 596 - -
Aed3g2491 756 Pfam Hsp70 protein 4 667 IPR013126 GO:0005524|GO:0140662
Aed3g2491 756 Gene3D - 186 361 - -
Aed3g2491 756 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 386 530 IPR029047 -
Aed3g2491 756 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 753 - -
Aed3g2491 756 PRINTS 70kDa heat shock protein signature 2 15 - -
Aed3g2491 756 PRINTS 70kDa heat shock protein signature 364 384 - -
Aed3g2491 756 PRINTS 70kDa heat shock protein signature 473 489 - -
Aed3g2491 756 PRINTS 70kDa heat shock protein signature 140 160 - -
Aed3g2491 756 PRINTS 70kDa heat shock protein signature 30 42 - -
Aed3g2491 756 PRINTS 70kDa heat shock protein signature 389 408 - -
Aed3g2491 756 PRINTS 70kDa heat shock protein signature 333 349 - -
Aed3g2491 756 Gene3D - 568 679 IPR029048 -
Aed3g2491 756 CDD HSPA4_like_NDB 2 382 - -
Aed3g2491 756 SUPERFAMILY Actin-like ATPase domain 196 381 IPR043129 -
Aed3g2491 756 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 570 667 IPR029048 -
Aed3g2491 756 Gene3D - 38 113 - -
Aed3g2491 756 Gene3D - 5 375 - -
Aed3g2491 756 PANTHER HSC70CB, ISOFORM G-RELATED 1 753 - -
Aed3g2491 756 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 385 601 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2491 Aed-Chr3 27422024 27427191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2491 4 436 Calmodulin-binding Proteins AT1G16030 34.783 7.71e-82 272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2491 3 27422024 27427191 Aed3g2491 3 27422024 27427191 ECH