Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2485 ATGAGTCTTCTTTTGTTAAGTTTCCTCTTGCTCATCCCAATCCTTCTTCTGCTTAAAAGAAAAGGAAAATCGTCCAAAAGGGTCCCTCCAGGTTCACTTGGAATACCTGTTATTGGCCAAAGCCTTGGCCTTCTTCGAGCTATGCGTGCCAACACAGCAGAAAAATGGGTTCAAGAAAGAATCAACAAGTATGGTCCCATTTCAAAGCTAAGCCTCTTTGGAAAACCAACAGTTTTAATCCATGGACAGGCTGCAAATAAGTTTCTATTCTCCGGTGGCGGTAACGCAATTGCTAACCAGCAAACACAGTCCATCAAAATGATCCTAGGTGACCGGACGTTGCTGGAACTGAGTGGTGAAGATCACAGCAGAGTCAGAGGTGCCCTTGTGTCATTCTTGAAGCCAGAATCCTTGAAGCAATATGTTGGGAAAATGGATGAAGAAGTTAGAAGGCACCTTGAGATGCATTGGCAGGGGAAACAGCAGGTCAAGGTATTGCCCCTGATGAAGACTCTCACATTCAACATAATTTGCTCTCTTCTGTTTGGTCTTGAGCGTGGAAAACAAAGAGATCAATTCCTGGATTCCTTCCAAGCCATGATAGAAGGAATGTGGTCGGTCCCAATTAATTTTCCCTTCACACGCTACAATCGCAGCCTAAGAGAAAGTGCAAGAATCCAGAACATGTTGAAGGAAATTGTGCACAAGAAGAAGATTGAACTTGAGCAAATTGCGGCATCTGCACACCAAGACTTGATCAGTTGCTTGTTAGGCATGGTTGATGAAGATGGCAAACAAGTTATGACTGAGAAGGAAATCTTTGACAACATTAAGCTTGTCATGGTTGCTGGACATGACACTTCATCTGTTGTAATCACTTTCATCATCCGACTCTTAGCCAACGAACCTGCTATTTTTGCAGCAGTTCTTCAAGAGATAGCAAAAAGCAAGCCCTCAGGAGAGGCATTGACATGGGAAGACCTTTCAAAGATGAAGTACACCTGGAGAGTAGCAATGGAAACTCTTAGGATGTTTCCTCCTCTTTTTGGTGGCTTCAGAAAGGCTGCAACGGATATTGAATATGATGGATACCTCATACCCAAAGGGTGGCAGATCTTCTGGGTCACATCAATGACCCACATGGACAAAAGCATTTTTCCTGAGCCATCAAAGTTTGATCCTAGTAGATTTGAAAACCAAGCATCTGTCCCACCCTATTGCTTCATTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGGTATGAGTTTGCCAGGCTTGAAACTCTTGTTGCAATTCATTACCTTGTGACTCGGTTCAGTTGGAAGCTATGTTCAGACAACTTCTTCAGTAGGGATCCAATGCCAGCACCAACTCAAGGGCTACTAGTTCAAATTTGCCCAAGGAGACTTTCTTAA 1416 0.4364 MSLLLLSFLLLIPILLLLKRKGKSSKRVPPGSLGIPVIGQSLGLLRAMRANTAEKWVQERINKYGPISKLSLFGKPTVLIHGQAANKFLFSGGGNAIANQQTQSIKMILGDRTLLELSGEDHSRVRGALVSFLKPESLKQYVGKMDEEVRRHLEMHWQGKQQVKVLPLMKTLTFNIICSLLFGLERGKQRDQFLDSFQAMIEGMWSVPINFPFTRYNRSLRESARIQNMLKEIVHKKKIELEQIAASAHQDLISCLLGMVDEDGKQVMTEKEIFDNIKLVMVAGHDTSSVVITFIIRLLANEPAIFAAVLQEIAKSKPSGEALTWEDLSKMKYTWRVAMETLRMFPPLFGGFRKAATDIEYDGYLIPKGWQIFWVTSMTHMDKSIFPEPSKFDPSRFENQASVPPYCFIPFGGGARICPGYEFARLETLVAIHYLVTRFSWKLCSDNFFSRDPMPAPTQGLLVQICPRRLS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2485 471 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PANTHER OS07G0520300 PROTEIN 6 467 - -
Aed3g2485 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Aed3g2485 471 SUPERFAMILY Cytochrome P450 24 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 Gene3D Cytochrome P450 18 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PANTHER CYTOCHROME P450 26 6 467 - -
Aed3g2485 471 Pfam Cytochrome P450 29 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2485 471 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2485 Aed-Chr3 27372015 27374907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2485 8 447 Cytochrome P450 AT5G45340 32.883 8.93e-75 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2485 - - gmx:100790001 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2485 3 27372015 27374907 Aed3g2485 3 27372015 27374907 ECH