Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2474 ATGATTTGCACCGTGAAACAGCCCGCCATATCGATCAGAGGTTCTGATGTTTTCCTGCGTAAAAAGGGTTCATCTTTAACCCCAGTGCAGTCATGTTCCCTCGTTCCACCTTCTTCCCTCCCAAGGGAAAAAAACTCTCTGAGATCGTTGGTGTCAGTGCCAAAGCCACTGCACCTTTCTCGTGTTGGTTTTGGAGATTTTGTTGGGCCTCTGGTGAGGCGTGAGCATGAGCGAGGTGGTGATTTGGTGGCACGTGGGGCTTATGAGTCAGATAGATCAGAGGTTGAAGGGGGTGGCAATAGGGCTCCATCAGAGGCTGCAAAGAAGGTGAAAATAGGGATATACTTTGCAACGTGGTGGGCTCTGAATGTGGTGTTCAATATATATAACAAGAAGGTGCTGAATGCATTCCCCTACCCTTGGCTCACATCAACTCTCTCCCTTGCATGTGGCTCTCTCATCATGTTGTTCCTTTGGGCCACCAGGCTAGTTGAGCCTCCCAAGACTGATCCTGAGTTCTGGAAGAATTTGTTCCCTGTTGCTGTTTTGCATACAATAGGACACGTAGCGGCAACAGTTAGCATGTCAAAAGTAGCGGTATCATTCACACATATTATTAAGAGTGCTGAGCCTGCTTTCACTGTATTTGTTTCCAGACTAATGGGAGAGAGATTCCCAGGGCCAGTCTACATGTCTTTAATCCCAATCATCGGTGGATGTGCACTTGCAGCTGTCACTGAGCTCAATTTCAATATGATTGGTTTTATGGGGGCTATGATATCGAATTTGGCATTCGTACTACGGAATATCTATTCGAAAAAGGGGATGAAGGGAAAAGCAGTTAGTGGAATGAACTACTATGGATGTATATCAATGATGTCCCTTGTGATTCTGACACCATTTGCAATTGCTGTGGAGGGACCACAGATGTGGGCAGCAGGATGGAAAACAGCAGTGTCTCAAATTGGACCCCAGTTTATATGGTGGGTGGTGGCTCAGAGCGTATTTTATCATCTCTACAATCAAGTGTCATACATGTCTCTGGATGAGATATCTCCATTGACATTCAGCATTGGAAACACCATGAAACGTGTTTCTGTTATAGTTTCTTCTATCATTATCTTCCAGACACCAGTTCAGCCTGTTAATGCTCTAGGAGCTGCTATTGCCATCCTCGGAACCTTCTTGCAAAGCAGTAGTAGGGTTGAGGAGTTAGCTGATTTTGATTCATACATGGCCACCAATAAGGAATGTGGAATGGTGATAGATGGAAGAGAAGGTAAAAGAAAAGAAGGTTATAATTGGAACCCCGTTGAGCACGCACGCGATGACAACGTATTTCTTTGCCTCGTTGAGTTCGTTAGAGTTTTGGAGAAAGAGAAAAGACGAGGTTGA 1395 0.4509 MICTVKQPAISIRGSDVFLRKKGSSLTPVQSCSLVPPSSLPREKNSLRSLVSVPKPLHLSRVGFGDFVGPLVRREHERGGDLVARGAYESDRSEVEGGGNRAPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLIMLFLWATRLVEPPKTDPEFWKNLFPVAVLHTIGHVAATVSMSKVAVSFTHIIKSAEPAFTVFVSRLMGERFPGPVYMSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVLRNIYSKKGMKGKAVSGMNYYGCISMMSLVILTPFAIAVEGPQMWAAGWKTAVSQIGPQFIWWVVAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRVSVIVSSIIIFQTPVQPVNALGAAIAILGTFLQSSSRVEELADFDSYMATNKECGMVIDGREGKRKEGYNWNPVEHARDDNVFLCLVEFVRVLEKEKRRG 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2474 464 PANTHER SOLUTE CARRIER FAMILY 35 38 400 - -
Aed3g2474 464 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 38 400 - -
Aed3g2474 464 Pfam Triose-phosphate Transporter family 111 397 IPR004853 -
Aed3g2474 464 SUPERFAMILY Multidrug resistance efflux transporter EmrE 152 245 - -
Aed3g2474 464 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 111 399 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2474 Aed-Chr3 27312682 27314936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2474 1 402 Antiporters AT5G54800 69.343 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2474 K15283 - gmx:100787351 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2474 3 27312682 27314936 Aed4g2533 4 27260225 27265417 ECH
Aed3g2474 3 27312682 27314936 Aed3g2474 3 27312682 27314936 ECH
Aed4g2533 4 27260225 27265417 Aed3g2474 3 27312682 27314936 PCT