Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2464 ATGGATACCAAGAAGCTCCAGCCTCGCTTTTCTCTCGGCCGCCAATCCTCCCTCGCGCCGGAGCGCGGCGGCGCCGTCGTCGAAGCGTCGGAGGCGCTGGACTCGGCGGTCCGGTTGATGTATCTGGCCAACGAAGGTGACTTGGACGGGATTAAGGAGCTCTTGGACGCCGGGAGTGACGTCAATTTCACCGACATTGACGGCCGTACCGCCCTCCACGTCGCCGCCTGCAATGGCCGCACCGACGTCGTTGACTTGCTGCTCCGACAAGGCGCCGACGTCGATCCCCAAGACCGCTGGGGCAGCAGCCCTCTAGCTGATGCAATGTACTACAAAAATCTCAACGTCGTCAAGCTTTTGGAGAAACACGGTGCAAGACCCCCGATGGCTCCCATGCATGTGCAAAATGCTCGTGAAGTCCCCGAGTATGAGATTGATGCTTCTGAACTTGATTTTACTAATAGCGTTTGCATAACAAAGGGAACTTTCCGGATTGCATTATGGCGTGGCACTCAGGTTGCTGTCAAGACGCTTGGGGAGGAATTGTTCACTGATGATGATAAAGTGTGGGTTGGTCTACTTATGCAATCTGCATTTCACGATGAGCTTACATTACTTGAGAAAATAAGGCATCCAAATGTAGTCCAGTTTTTGGGTGCTGTTACACAAAGCACACCAATGATGATTGTCACAGAATATCTCCCCCAGGGGGATCTGCGTGCCTACTTGAAGCGGAAAGGTGCATTAAAACCAGTAACAGCTGTAAAGTTTGCACTTGATATTGCTAGGGGTATGAACTATTTGCATGAACATAAACCAGAAGCCATTATACACCGAGATCTTGAACCTCCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTTAAAGTAGCAAAAACAGTCAAAGAAGACAAACCTGTGACAAGTCTGGATACATCATGGCGTTATGTTGCTCCAGAGGTCTATAGAAATGAAGAATACGACACAAAAGTGGATGTGTTTTCATTTGCCCTAATATTACAGGAGATGATTGAAGGTTGTCCACCGTTTTATGCAAAGCCAGAAAATGAAGTTCCTAAAGCATATGTTGAGAATGAGCGTCCTCCATTTAGAGCTTCACCAAAGCTTTATGCTTATGGACTAAAACAGTTAATTGAGGAATGCTGGGATGAAAAACCACACAGAAGACCAACATATAGGCAAATAATTGGCAGATTGGAAGAGATCTATTACCATCTTACTCAAAAGAGGCGCTGGAAGGTTCGGGCTCCTGGATGCATCCAGAACCTGGAGGCTCTATTTAAGGGTAATCGCACAAGTCCAAGTAGCCGATCATCTCGCTCTACGGCCAGATAA 1386 0.4776 MDTKKLQPRFSLGRQSSLAPERGGAVVEASEALDSAVRLMYLANEGDLDGIKELLDAGSDVNFTDIDGRTALHVAACNGRTDVVDLLLRQGADVDPQDRWGSSPLADAMYYKNLNVVKLLEKHGARPPMAPMHVQNAREVPEYEIDASELDFTNSVCITKGTFRIALWRGTQVAVKTLGEELFTDDDKVWVGLLMQSAFHDELTLLEKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLRAYLKRKGALKPVTAVKFALDIARGMNYLHEHKPEAIIHRDLEPPNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSLDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYAKPENEVPKAYVENERPPFRASPKLYAYGLKQLIEECWDEKPHRRPTYRQIIGRLEEIYYHLTQKRRWKVRAPGCIQNLEALFKGNRTSPSSRSSRSTAR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2464 461 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 443 - -
Aed3g2464 461 SMART ANK_2a 34 63 IPR002110 GO:0005515
Aed3g2464 461 SMART ANK_2a 100 129 IPR002110 GO:0005515
Aed3g2464 461 SMART ANK_2a 67 96 IPR002110 GO:0005515
Aed3g2464 461 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 10 443 - -
Aed3g2464 461 CDD STKc_MAP3K-like 166 416 - -
Aed3g2464 461 Pfam Protein tyrosine and serine/threonine kinase 170 415 IPR001245 GO:0004672|GO:0006468
Aed3g2464 461 PRINTS Tyrosine kinase catalytic domain signature 387 409 IPR001245 GO:0004672|GO:0006468
Aed3g2464 461 PRINTS Tyrosine kinase catalytic domain signature 341 363 IPR001245 GO:0004672|GO:0006468
Aed3g2464 461 PRINTS Tyrosine kinase catalytic domain signature 270 288 IPR001245 GO:0004672|GO:0006468
Aed3g2464 461 PRINTS Tyrosine kinase catalytic domain signature 231 244 IPR001245 GO:0004672|GO:0006468
Aed3g2464 461 ProSiteProfiles Protein kinase domain profile. 117 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2464 461 Gene3D - 28 140 IPR036770 -
Aed3g2464 461 SUPERFAMILY Ankyrin repeat 38 130 IPR036770 -
Aed3g2464 461 Gene3D Phosphorylase Kinase; domain 1 144 234 - -
Aed3g2464 461 PIRSF ILK 2 440 - -
Aed3g2464 461 Gene3D Transferase(Phosphotransferase) domain 1 235 435 - -
Aed3g2464 461 ProSiteProfiles Ankyrin repeat region circular profile. 67 99 - -
Aed3g2464 461 SUPERFAMILY Protein kinase-like (PK-like) 156 418 IPR011009 -
Aed3g2464 461 Pfam Ankyrin repeats (3 copies) 39 127 IPR002110 GO:0005515
Aed3g2464 461 ProSiteProfiles Ankyrin repeat profile. 67 99 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2464 Aed-Chr3 27265766 27269597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2464 1 431 MAP Kinase Kinase Kinase AT4G18950 64.692 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Aed3g2464 PK_Tyr_Ser-Thr 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2464 - - gmx:100795964 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2464 3 27265766 27269597 Aed10g0154 10 1162109 1163149 PCT