Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2456 ATGTCTGGGGATATTATCTATTTTATTTTGTGGGGTTTGTTTCCCCTATTACTACTTTTGCTTCTCTCTTTCAATTTCTTGAGGCACAAGCAATGCTACAAAGATAAAAGAAAGTTGCCACCTGGGGAAATGGGGTTTCCACTGATTGGGGAGACCATGGAATTCTTCAATGCTCAAAAGAGAAACCAATTGTTTGAAGAGTTTGTCCATCCTCGTCTTCTGAAACATGGGAAGATCTTCAGAACAAGAATAATGGGGTCTCCAACTGTGGTTGTAAATGGAGCTGAGGCCAATAAATTCTTGTTGTCTAATGAGTTCAAGTTGGTGAAAAGCTCTTGGCCTTCTTCCTCAGTTGAGCTCATGGGAAGGGACTCCATCATGGAGAAAGATGGAGAAAGGCACCGATTCCTCCGCGGTGTTATTGGCACAAGCTTTGGTGGTTATGCTGGACTTGAGCTACTAGTTCCAAAACTGTGCAATTCTGTACAGTTTCATTTAGCTACAAACTGGAAGGGCCAAGAAAAGATTAGTCTTTACCGTTCAACAAAAGTCCTTAGTTTTAGCATAGTGTTTGAGTGTTTGTTGGGGATCAAAGTGGAGTCAGGTATGCTAGATACCTTTGAAAGAGTGTTGGAAGGAGTGTTTTCTCCAGCAGTTATGTTTCCAGGTTCTAAATTTTGGAGAGCAAAGAAGGCCAGGGTGGAGATAGAACAGATGTTGGTCAAAGTGGTGAGAGAGAAGAGAAGGAAAATGGAAGGAAGCTTGCAAAGAGAAAAAGATGGCATGTTGCTGTCAAAATTGGTACATGGTATGATCCAAGGGGAGATCAGTGAGAAAGAGGTCATAGACAATGTTGTGCTACTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCTGTTGCTATGACATTCAAGATGTTGGCTCAGCATCCTGATTGCTATGGAAAACTTCTTCAAGAACATGCTGCTATAATGAGCAACAAAAGCCGGGGTGAGAATCTCACAATGGAGGACATAAAGAAGATGAGGTATACCTGGCAGGTTGCTAGAGAAAGCATGAGATTGTTTCCTCCAATCTTTGGTTCTTTCAGGAAGGCTATAACTGATATTGAATATGAAGGATTCATTATACCTAGAGGATGGAAGGTGCTATGGACAACATATGGGACACATTACAATGAAGAGTATTTTAAGGATCCTATGAGTTTCAAGCCAAGTAGGTTTGAGGAGGGAATACCCCAATATACATATGTTCCCTTTGGAGGAGGGCCTAGAGTGTGTGCAGGGTACCAATTAGCTAAGTTAAATATACTCATATATGTGCACTATGTTGTGACCCAATATGAATGGTTCTTACTCCATCCAGATGAGCCAGTTGCAATGGATCCCTTGCCTTTCCCTTCCTTTGGAATGCCCATCAGAATTTCTCCCATCGTGACACGACCTCAATGA 1452 0.4167 MSGDIIYFILWGLFPLLLLLLLSFNFLRHKQCYKDKRKLPPGEMGFPLIGETMEFFNAQKRNQLFEEFVHPRLLKHGKIFRTRIMGSPTVVVNGAEANKFLLSNEFKLVKSSWPSSSVELMGRDSIMEKDGERHRFLRGVIGTSFGGYAGLELLVPKLCNSVQFHLATNWKGQEKISLYRSTKVLSFSIVFECLLGIKVESGMLDTFERVLEGVFSPAVMFPGSKFWRAKKARVEIEQMLVKVVREKRRKMEGSLQREKDGMLLSKLVHGMIQGEISEKEVIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPDCYGKLLQEHAAIMSNKSRGENLTMEDIKKMRYTWQVARESMRLFPPIFGSFRKAITDIEYEGFIIPRGWKVLWTTYGTHYNEEYFKDPMSFKPSRFEEGIPQYTYVPFGGGPRVCAGYQLAKLNILIYVHYVVTQYEWFLLHPDEPVAMDPLPFPSFGMPIRISPIVTRPQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2456 483 Gene3D Cytochrome P450 29 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 SUPERFAMILY Cytochrome P450 34 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Aed3g2456 483 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2456 483 PANTHER TAXADIENE 5-ALPHA HYDROXYLASE 19 477 - -
Aed3g2456 483 PANTHER CYTOCHROME P450 26 19 477 - -
Aed3g2456 483 Pfam Cytochrome P450 40 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2456 Aed-Chr3 27204588 27206352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2456 39 383 Cytochrome P450 AT2G42850 66.377 1.42e-160 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2456 - - gmx:100793336 893.264