Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2450 ATGCAGCAAGATCAAAGGAAAAAGGGTTCAATGGAGATGGAATTTTTCTCGGATTATGGCAATGCCAGCAGGTACAAAATTCAAGAGGTCATTGGAAAAGGAAGCTATGGTGTTGTTTGTTCAGCTATTGACACTCATACTGGTGAAAAAGTAGCAATTAAAAAGATTCATGATATCTTTGAGCATGTATCTGATGCTGCGCGTATTCTGCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCATGTTATGCTGCCCCCTTCTAGGAGGGACTTTAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACCTAACAAAAGAGCACTATCAATTTTTTCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACTGGAAATGTCTATCACCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATATGTGATTTTGGGTTAGCTAGAGTTGCTTTCAATGACACACCAACAACTGTATTTTGGACGGATTATGTTGCTACGAGGTGGTATAGAGCACCAGAACTCTGTGGATCGTTTTACTCAAGGTATACTCCAGCAATTGACATTTGGAGTATAGGTTGCATCTTTGCTGAAGTATTAATAGGAAGGCCTCTTTTCCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACAGATCTGCTTGGCACTCCCCCACTGGATACTATATCCAAGGTACGCAATGATAAGGCACGGAAATACCTGACTAGTATGAGGAAAAAGCAGCCCATACCATTTGCACAAAAATTTCCCAATGCAGATCCTTTAGCACTAGGACTACTGAAAAGGTTGCTTGCCTTTGATCCAAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCAAAAGTTGAGAGGGAACCATCCTGCCAGCCTATTACAAAAATGGAGTTTGAGTTCGAAAGGAGAAGAGTCACAAAGGAAGAAATTGGAGAGTTAATTTTCCGTGAGATTCTAGAGTACCATCCTCAACTATTGAAAGACTACATAAATGGATCAGAGAGAACTAATTTTCTTTACCCAAGTGCTGTTGATCAATTTAAACAGCAGTTTGCTCATCTTGAGGAAAATAGTGGTAAAAGTTGTCCAGTTAGGCCACTTGAAAGAAAGCATGCATCACTGCCCAGGTCAACAATTGTACACTCAAATATGGTACCCTCGAAAGAGCAATCAAATATTGCTTCCTGCATAAACCGGCAAACAGCTGAGGAATATAATAATAATAATTCCAGGGATACAGAAAATCCTGCGCCAAGGTCCATTCAGGGTCTGCAAAAACTTCCACTAGCAAAACCTGGAAAAGTTGTTGGGCCAGTTATTCCATACGAGTATGCAAGTGTTGTGAAGGGCTCATACGATCCAAGGACATTTATTAGAGGTTCTGTTTTTCCTTCTCAACAACCTACGAATCATTATCAAAGATCAAGTTCTGGAAAACAAGAAAGGTCAGCAACAGAAGCTGACAATGATGTGTCTCTACAATCAAAACTTGACCAGCAATGTGGTGTGAATGCCAAAATAGCACCAGACATAGCTATAAATAATGATGCCAACCCTTTTTTCATGACACGAGCAGGAGTGAACAAGATAGAGCAGGATGACCGAATAGCCATTGAGACAAAGTTGCTGCAGTCAAAGACTCAGACTCAGACTCATCAATATGGTGGGATTAGTACCACTGCTCATAGAAAGGTTGGACCTGTTCAGTATGGTAAGATTATAAGAAAATCGTACAAGAAAGAAATGGTGGTACGGACCCCCATTAGCATTAGCAGAAGGAAGAAGAAGAAAAAAAAAAAAAAGGTGTGGCATGCATTAAATAAAAAGAGTGGTGTAGTGTGTGAATGTGACAAGAACAGAGGGATCCGAGTGGGTCTGAGCACATGGAGTCCCATATGCCCAACACAACCAAATCTCTCATACAATCCCAATGACCCAATCCGCCGATTGGTTTCCTTCTTGGAAACACCACCACCTCCCCTCTCTGATTCTCCAGGGCCACACCACCATCACTAA 2130 0.4085 MQQDQRKKGSMEMEFFSDYGNASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTGNVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFYSRYTPAIDIWSIGCIFAEVLIGRPLFPGKNVVHQLDLMTDLLGTPPLDTISKVRNDKARKYLTSMRKKQPIPFAQKFPNADPLALGLLKRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIGELIFREILEYHPQLLKDYINGSERTNFLYPSAVDQFKQQFAHLEENSGKSCPVRPLERKHASLPRSTIVHSNMVPSKEQSNIASCINRQTAEEYNNNNSRDTENPAPRSIQGLQKLPLAKPGKVVGPVIPYEYASVVKGSYDPRTFIRGSVFPSQQPTNHYQRSSSGKQERSATEADNDVSLQSKLDQQCGVNAKIAPDIAINNDANPFFMTRAGVNKIEQDDRIAIETKLLQSKTQTQTHQYGGISTTAHRKVGPVQYGKIIRKSYKKEMVVRTPISISRRKKKKKKKKVWHALNKKSGVVCECDKNRGIRVGLSTWSPICPTQPNLSYNPNDPIRRLVSFLETPPPPLSDSPGPHHHH 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2450 709 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2450 709 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aed3g2450 709 MobiDBLite consensus disorder prediction 498 518 - -
Aed3g2450 709 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Aed3g2450 709 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2450 709 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2450 709 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 495 - -
Aed3g2450 709 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Aed3g2450 709 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 495 - -
Aed3g2450 709 MobiDBLite consensus disorder prediction 497 529 - -
Aed3g2450 709 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Aed3g2450 709 CDD STKc_TDY_MAPK 24 361 - -
Aed3g2450 709 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2450 Aed-Chr3 27181509 27188875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2450 1 445 MAP Kinase Gene Family AT2G42880 85.618 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aed3g2450 Pkinase 9.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2450 - - aprc:113848523 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2557 4 27518571 27524765 Aed3g2450 3 27181509 27188875 PCT