Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2445 ATGGTAGATGAACAAAACAAGATGTGGACCACAAGAGCATTCGAGGCCAGGAAGAACTTGATTGCCTTGGAAGCCAATAAGTCCATTAATCCAAAGTTCCCAGGTGGAAGAATGAGTTTTGTGATGCCCTTGTGGAAAATGTTGACAGTTGCTGATGTGGCAAAAGCTGTTTGTTGTGTTAGTAGCAGAGCTAACAGAATAATTGCAGTGAGTGAAATTGAGTATTATTATCATTCGGATCTACTTAAGCTTTTCTGTGAAGCAGAAGAGAGCGATTGGCTCTGTTACTGCACATTTGCCTCAGAGTGTCTTACGTTTGGTGAAATGGATAGAAAGCAAGAACAAGACAAGGGAAACTCAAACATGTCTGGCATTGATGTAGCTCTAATATCTCCCAAAGTCCCAAAAGCAGTTTCACCGGTTTCTTCTGCAGCAGAAGGTGACACCTTAAGGCGACCACGTGGCCGGCCGGCCGGATCCAAAAACAAACCTAAGCCACCAATAATTGTCACCAGAGATAGTGCTAATGCACTGAAGGCTCATGCCATGGAAGTGAGCTCTGGCTGTGATGTGAATGAAAGTTTGTTGAACTTTGCAAGGAGAAAACAACGTGGTCTTTACATACTCAATGGAACAGGCTGTGTAACAAATGTAACATTGCGCCAACCAGGCTCATCTGGTGCCATTGTGACCCTTCATGGTCGGTTCGAGATTTTGTCACTGCTAGGGTCAATCCTTCCCCCACCAGCCCCTCCAGGAATCACAGGCCTCACAATTTACTTGGCAGGTGCTCAAGGGCAAGTTGTGGGAGGTGCTGTTGTTGGTGCTTTGATTGCTTCAGGCCCTCTTGTAATCATGGCTGCATCATTCATGCATGCTACTTTTGATCGCCTTCCATTGGAAGATGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACGCACCATCTTGATATCTCTGACTTGTACGCAATGCCACAGAACCTGCTCATGAATGGCACAATGCCCCCAGAGATATACTCTTGGGCACCAGGGAGAAACTTGTCAAAAACCTGA 1071 0.4575 MVDEQNKMWTTRAFEARKNLIALEANKSINPKFPGGRMSFVMPLWKMLTVADVAKAVCCVSSRANRIIAVSEIEYYYHSDLLKLFCEAEESDWLCYCTFASECLTFGEMDRKQEQDKGNSNMSGIDVALISPKVPKAVSPVSSAAEGDTLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLYILNGTGCVTNVTLRQPGSSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPLVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRTHHLDISDLYAMPQNLLMNGTMPPEIYSWAPGRNLSKT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2445 356 SUPERFAMILY AF0104/ALDC/Ptd012-like 175 307 - -
Aed3g2445 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 109 355 - -
Aed3g2445 356 MobiDBLite consensus disorder prediction 138 169 - -
Aed3g2445 356 Pfam Plants and Prokaryotes Conserved (PCC) domain 180 290 IPR005175 -
Aed3g2445 356 ProSiteProfiles PPC domain profile profile. 175 313 IPR005175 -
Aed3g2445 356 CDD DUF296 181 261 IPR005175 -
Aed3g2445 356 Gene3D - 178 321 - -
Aed3g2445 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 109 355 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2445 Aed-Chr3 27154375 27156426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2445 134 353 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 72.851 1.03e-100 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2445 3 27154375 27156426 Aed3g2445 3 27154375 27156426 ECH