Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2444 ATGCAAGAGGCCCTCCTGAGCCCTTGCTCTAGGAAAGAAGTAGACTCACCAAATAGACCATCACCCAAGGAACTATCTGTCCATGATCTTGGTCTTGCTTTTGCCTCATCACTGTTCCAATCTAGTTCTTCTCATGTCACCAATGAAGCCAAGAGTTCCATGAACCTCATAGCCAACTTGGCCTTCAAGAAAGGGAAGATTATCCATCGCTCTCGCTCTGCACCATCTTTATTATTCACTGACAGAGCGGTAGATTTTCGTAAGCCCTCTGAACCACACAAGTCATCAACTTTAATAGTTAGGCAATCATTTATTGGTGTTTTCTTGTATGTAGCAACTGGGGTAGCAGTGTACATGACCAGTGGGAGTTTCAGTGGCACTACCACTTTCAGGCCTGTAGATGCTGTGTACTTTACAATGGTAACTCTCTGCACTATTGGGTATGGAGATATCGTTCCCGACTCCACGTTTACCAAGATCTTTACATGCGGTTTCATTTTGGTGGGTTTTGGATTTCTTGGTTTTCTGCTCAATGGATTGGTTGCATACATTTGTGATACACAAGAGACATTCTTGTTGAGCATGATGGATGAGAATAGATATAAGAAAATTCTCAGGACGTATATGGTTGATGAAACGAAAGGAAGAATGAGGATAAGAACCAAAGTTTGTCTGGCTTTGGCTGTTGTCATTGGCTGCATTGCTATAGGAACAGTCACAGTGCACATTGTTGAGGACCTGAATTGGGATGACAGTATTTATCTCTCCATTACTTCGGTTACAACGGTTGGTTATGGGGACTTTTCTCTCAGAACTGTAACCGGAAGATGTTTTGCAATTATATGGCTTTTGGTAAGCACACTGGCCGTTGCCAGGGCCTTTATATACCTCACTGAATATAGTATTCACAAGAGAAATCGCAAGATGGCACAATGGGTTCTTCAGAAGAAGATAACCGTATCAGATTTAGCAGCTGCAGACCTTGATAATGATGGATCAATCAGCAAGTCTGAATTTGTCATATACAAGCTTAAGCAAATGGGGAAGATTAGTGAGATAGACATTCTGCAAATAAGCAAACAATTTGATTCCTTGGAACATGGCACGTATGGCAAGATTACTCTTGCTGACCTCATGGAAACTGTCTAA 1149 0.4186 MQEALLSPCSRKEVDSPNRPSPKELSVHDLGLAFASSLFQSSSSHVTNEAKSSMNLIANLAFKKGKIIHRSRSAPSLLFTDRAVDFRKPSEPHKSSTLIVRQSFIGVFLYVATGVAVYMTSGSFSGTTTFRPVDAVYFTMVTLCTIGYGDIVPDSTFTKIFTCGFILVGFGFLGFLLNGLVAYICDTQETFLLSMMDENRYKKILRTYMVDETKGRMRIRTKVCLALAVVIGCIAIGTVTVHIVEDLNWDDSIYLSITSVTTVGYGDFSLRTVTGRCFAIIWLLVSTLAVARAFIYLTEYSIHKRNRKMAQWVLQKKITVSDLAAADLDNDGSISKSEFVIYKLKQMGKISEIDILQISKQFDSLEHGTYGKITLADLMETV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2444 382 SUPERFAMILY Voltage-gated potassium channels 85 184 - -
Aed3g2444 382 ProSitePatterns EF-hand calcium-binding domain. 327 339 IPR018247 -
Aed3g2444 382 Gene3D - 185 326 - -
Aed3g2444 382 SUPERFAMILY Voltage-gated potassium channels 197 318 - -
Aed3g2444 382 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 48 377 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aed3g2444 382 Gene3D - 87 184 - -
Aed3g2444 382 PANTHER OS01G0696100 PROTEIN 48 377 - -
Aed3g2444 382 PRINTS Two pore domain K+ channel signature 141 169 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aed3g2444 382 PRINTS Two pore domain K+ channel signature 261 270 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aed3g2444 382 MobiDBLite consensus disorder prediction 1 23 - -
Aed3g2444 382 Pfam Ion channel 107 183 IPR013099 -
Aed3g2444 382 Pfam Ion channel 229 294 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2444 Aed-Chr3 27150302 27151959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2444 64 380 Ion Channels AT4G18160 49.371 2.05e-107 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2444 K05389 - gmx:100789639 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2444 3 27150302 27151959 Aed3g2444 3 27150302 27151959 ECH