Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2441 ATGTCCAAAAACCAAAACCCAAAGCAAATTGAAATGGAAATGGCATTGTGGCCCCACTTGTTACCTACTGCTGTGCCACTACTACATCTTTTGCAGCATCTGGATTTTGCTGTAGGAAGAAGATTCAGGAGTCTAGCTACCTTGGATCACCACAAAGATGTGCGTTTCAAAGCCTTGAGTAAGGGGGAGTACTTAACTTGCATCCTGTACTCGGGTGGGAATGTCTTGGTTCTACCAGCTGAAGAACTTGTGGGGACGATATTGATTGACTTGGTGCAACCAATTATGCTATCCAACAGTTCTTTGAATATGGAATTGTCAAAGAAGACGTCATTTTTGGGTTTGAAACGATGGGTTTTGATCGGGATAGGAGTTGGTGCATTTATAGTGTTGATTCTTATTATATTATCGATATGGGCAATGTTTCGGAGAAAGTCTAGGAGATCTCTGAACAAGTATTCTGTATCCCAAATACCAAATGTCTCAAAAGATATCGATGTTGACAAGGTTGGGGTGCAGAGTTCTCATGTTCAACCAGAAAATGTGGTTATTCATGTTCAAGACAAGACAAGCGATAAGAATTCAGATAATATATCAGTTCATTTGGCGAATAGCAAATCTGGTGATCCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCAATGTCGGCCGAAGAAGGAAGCTCTGGGAATGTTAAGAAGCAATCTACGTTGTCACATGGAGGGCTGGCCACTGCCTCTCCCTTAGTTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAAATGGCAACCACTCGTTTCTCAAGCGAGAACATCATTGGAGAGGGTGGATATGGAATTGTTTACAGGGGCAAACTGATTAATGGAACTGAGGTGGCAGTGAAGAAGCTTCTTAACAACTTGGGACAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAGCATCTTGTACGCCTTCTTGGTTATTGTGTAGAAGGAGTTCATAGGCTGCTTGTCTACGAATATGTTAACAATGGTAATTTGGAACAATGGTTACATGGAGACATGCACCAATATGGGACGCTTACCTGGGAGGCCCGCATAAAAGTTATACTTGGCACAGCCAAAGCGAGGGCCGAAGAAGTAGTGGACTCAAGCCTTGAAGTTAAACCACCACTACGTGCTTTGAAGCGCATTCTTTTGGTTGCACTTAGGTGTATTGATCCTGATGCCAACAAGAGGCCCAAAATGAGTCAAGATAGAAGAAATAGAAAGAGTGGCACTGCCAGCATGGAAATTGAAACCGTGAAGGATATTTCTGGTCCATCTGATGCTGAAAAGATGGGGCATTCTGAAAGCCACGTTGAAGGATAG 1422 0.429 MSKNQNPKQIEMEMALWPHLLPTAVPLLHLLQHLDFAVGRRFRSLATLDHHKDVRFKALSKGEYLTCILYSGGNVLVLPAEELVGTILIDLVQPIMLSNSSLNMELSKKTSFLGLKRWVLIGIGVGAFIVLILIILSIWAMFRRKSRRSLNKYSVSQIPNVSKDIDVDKVGVQSSHVQPENVVIHVQDKTSDKNSDNISVHLANSKSGDPDNISQCSSIYHHERGFSSMSAEEGSSGNVKKQSTLSHGGLATASPLVGLPEFSHLGWGHWFTLRDLEMATTRFSSENIIGEGGYGIVYRGKLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDMHQYGTLTWEARIKVILGTAKARAEEVVDSSLEVKPPLRALKRILLVALRCIDPDANKRPKMSQDRRNRKSGTASMEIETVKDISGPSDAEKMGHSESHVEG 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2441 473 ProSiteProfiles Protein kinase domain profile. 283 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2441 473 Coils Coil 303 323 - -
Aed3g2441 473 MobiDBLite consensus disorder prediction 428 473 - -
Aed3g2441 473 ProSitePatterns Protein kinases ATP-binding region signature. 289 312 IPR017441 GO:0005524
Aed3g2441 473 MobiDBLite consensus disorder prediction 428 444 - -
Aed3g2441 473 SUPERFAMILY Protein kinase-like (PK-like) 267 393 IPR011009 -
Aed3g2441 473 PANTHER OS01G0323000 PROTEIN 94 395 - -
Aed3g2441 473 PANTHER OS01G0323000 PROTEIN 394 472 - -
Aed3g2441 473 MobiDBLite consensus disorder prediction 196 214 - -
Aed3g2441 473 MobiDBLite consensus disorder prediction 190 214 - -
Aed3g2441 473 Pfam Protein tyrosine and serine/threonine kinase 286 391 IPR001245 GO:0004672|GO:0006468
Aed3g2441 473 MobiDBLite consensus disorder prediction 455 473 - -
Aed3g2441 473 Gene3D Phosphorylase Kinase; domain 1 264 358 - -
Aed3g2441 473 PANTHER RECEPTOR-LIKE KINASE PLANT 94 395 - -
Aed3g2441 473 PANTHER RECEPTOR-LIKE KINASE PLANT 394 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2441 Aed-Chr3 27131682 27136899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2441 119 395 Trihelix Transcription Factor Family AT1G23540 32.384 2.49e-34 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aed3g2441 PK_Tyr_Ser-Thr 1.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2441 - - gmx:100778444 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2441 3 27131682 27136899 Aed3g2441 3 27131682 27136899 ECH
Aed4g2564 4 27578544 27583908 Aed3g2441 3 27131682 27136899 PCT