Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2411 ATGAAAAAATCTGAGAGAAGAAGTAGCAGTGTAAGGAAGTACAACAAATCTGAAGTTCCACGCCTGCGATGGACACCTCAACTCCATCAACACTTTGTTCAAGCTATTGAAAGTCTAGGTGGAAAACACAAGGCAACTCCAAAAAGAATTTGTCAGCAGATGCGTGTGAAAGGACTGAGAATCGCTCACATAAAAAGCCATCTTCAGACGAAAGGTAACTCATTATATGAAAACAGGAATGTTCTCAAGCGGGAACTTCATCTGTTAGACGAAAATAATCAACTTTCACAAACCAGTACTGAAGAAACTGATTATGATCTAAACCAGGAACCACAGTCAAGTGATGATGTTGATATGTCAAATGAAGAACAAAATTTTGTTGATCTAATTTCCGTGATGCAATTGCAAAGTGAGAATAGCACAGAGATAATGCGTTTTTCTTCATCTACGCCGTCCACGTCTTTTCCAAATAATTACATCAACTTAGACCTAACAATCTGA 501 0.3792 MKKSERRSSSVRKYNKSEVPRLRWTPQLHQHFVQAIESLGGKHKATPKRICQQMRVKGLRIAHIKSHLQTKGNSLYENRNVLKRELHLLDENNQLSQTSTEETDYDLNQEPQSSDDVDMSNEEQNFVDLISVMQLQSENSTEIMRFSSSTPSTSFPNNYINLDLTI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2411 166 SUPERFAMILY Homeodomain-like 20 70 IPR009057 -
Aed3g2411 166 MobiDBLite consensus disorder prediction 95 118 - -
Aed3g2411 166 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 124 IPR044848 GO:0003700
Aed3g2411 166 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 69 IPR006447 GO:0003677
Aed3g2411 166 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 10 124 - -
Aed3g2411 166 Gene3D - 19 74 - -
Aed3g2411 166 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2411 Aed-Chr3 27006297 27007480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2411 9 69 G2-like Transcription Factor Family AT1G14600 60.656 1.03e-21 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed3g2411 Myb_DNA-binding 2.3e-05 CL0123