LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed3g2393	ATGGGAACTCCAACTCTTGGCCTTGTACTTGCACTCCTCCTTTTGTGCTTGCTGGCTTGCCCTGCTTCTTCTGTTTCTTCTCTTCCCATGTCTCTGAGAAAGCAAGCCTCTATCATGGTTTCTCTCAAACAAGATTTTGAGGCCAACACTGATTCCTTGAGCAGCTGGGACATGTCTAACTACATGTCCCTTTGCACTTGGGAGGGCATTCAGTGTGACCAAAAGAACCGTTCAGTGGTGTCATTGGACATATCCAACCTCAACCTTTCTGGCACACTTTCACCTTCCATCACAGGTCTAAGGAGCCTTGTGAGTGTTTCACTTGCTGGGAATGGCTTCTCAGGAGGGTTCCCTAGTGATATTCACAAGCTTGCAGGGTTGAGATTCCTCAACATATCAGGCAACGCCTTCAGTGGAGACATGAGATGGGAATTTTCTGAGTTGAAAGAGCTTCAAGTGGTTGATGCTTATGACAATGAGTTCAATTGCTCCCTCCCTCTTGGTGTCACTCAGCTTCCAAAGCTCAATAGCTTGAATTTTGGCGGGAATTATTTCTTCGGTGAAATCCCTCCAAGCTATGGAGACATGGTTCGGCTCAACTTTCTGTCTCTTGCAGGAAATGATTTGAGGGGTCTAATACCAACTCAGCTTGGGAATCTCACTAACCTGACACAGCTTTTCTTGGGATACTACAATCAATTTGATGGTGGAATCCCTCCTGAGTTTGGTAAGTTGGTTAATTTAGCTCATCTTGACCTTGCAAACTGTAGCTTGACAGGTCCAATTCCACCTGAGCTTGGCCAGAATGCTAAATTGGCTGAGCTTGACCTCTCAACAAACAAGCTCACTGGATTGCTGCCTAAATTTCTATGCTTTGGAAGGAGCCTGAGGATTTTGATCCTTCTCAACAATTTCCTCTTTGGATCTTTGCCTGCTGATCTTGGCCAATGCTACACACTCCAGAGAGTTCGTTTGGGACAGAACTACTTGACAGGGTCAATACCAAATGGTTTTCTTTACTTGCCTGAGTTGGCCCTTTTAGAATTGCAGAACAATTACCTCAGTGGTTGGCTTCCACAACAAACAAGCACTGCACCTTCCTCTAAACTTGGACAGTTGAATCTATCAAACAATCGCCTATCCGGGTCTCTTCCAACCTCTATTGGAAACTTCCCCAACTTGCAAATTCTACTGCTTCATGGAAATAGACTCTCGGGACAAATCCCTCCAGATATAGGGAGGTTGAAAAATATACTCAAGTTGGATATGAGTGTCAACAATTTCTCAGCTAGTATTCCTCCTGAGATAGGTAATTGTTTGTTGCTCACCTATTTAGATTTGAGCCAAAACCAACTATCAGGCCCTGTCCCAGTTCAGCTTTCTCAAATTCACATCATGAACTATCTCAATGTCTCATGGAACCACCTAAACCAAGGTCTTCCCAAGGAACTTGGTGCCATGAAGGGTTTGACTTCAGCAGATTTTTCTCACAATGACTTCTCTGGTTCAATACCTGAGGAGGGGCAATTCTCAGTATTTAACTCTACATCCTTTATGGGAAATCCTCAGCTCTGTGGATATGAGCTGAATCCATGTAAACATTCTTCAAATGCAGTGTTGGAGTCCCAAGACAGTGGCGGTGCAAGACCTGGAGTTCCTGGGAAGTATAAGCTTCTCTTTGCAGTGGCACTGTTGGCTTGTTCATTGGCATTTGCAACCTTGGCATTTATCAAGAGCAGAAAGCAAAGGAGGCACTCCAATTCATGGAAGCTCACAACATTTCAAAATCTTGAATATGGAAGTGAAGACATCATAGGGTGCATAAAGGAAAGCAATGTAATAGGAAGAGGTGGTGCTGGGGTTGTGTACCATGGAAGCATGCCAAATGGAGAGCAAGTAGCTGTGAAGAAGCTCTTGGGAATCAACAAAGGATGTTCTCATGATAATGGCCTCTCAGCAGAAATAAGGACACTGGGAAGAATCAGGCACAGGTACATTGTGAGGTTGCTGGCATTTTGTTCAAATAGAGAGACCAATTTGCTTGTTTATGATTACATGCCAAATGGAAGCTTAGGTGAAGTCTTGCATGGGAAGAGGGGGGAGTTTCTCAAGTGGGATACTAGGCTGAAAATAGCAACAGAAGCTGCAAAAGGCCTTTGCTATTTGCACCATGATTGTTCCCCTCTCATAATCCACAGAGATGTGAAGTCAAACAACATATTGTTGAACTCTGAATTTGAGGCTCATGTTGCGGATTTTGGACTTGCCAAGTTCTTGCAAGATACTGGGACTTCAGAGTGCATGTCTTCCATTGCTGGCTCTTATGGTTACATTGCTCCAGGTACTTGGTTTTAA	2355	0.4408	MGTPTLGLVLALLLLCLLACPASSVSSLPMSLRKQASIMVSLKQDFEANTDSLSSWDMSNYMSLCTWEGIQCDQKNRSVVSLDISNLNLSGTLSPSITGLRSLVSVSLAGNGFSGGFPSDIHKLAGLRFLNISGNAFSGDMRWEFSELKELQVVDAYDNEFNCSLPLGVTQLPKLNSLNFGGNYFFGEIPPSYGDMVRLNFLSLAGNDLRGLIPTQLGNLTNLTQLFLGYYNQFDGGIPPEFGKLVNLAHLDLANCSLTGPIPPELGQNAKLAELDLSTNKLTGLLPKFLCFGRSLRILILLNNFLFGSLPADLGQCYTLQRVRLGQNYLTGSIPNGFLYLPELALLELQNNYLSGWLPQQTSTAPSSKLGQLNLSNNRLSGSLPTSIGNFPNLQILLLHGNRLSGQIPPDIGRLKNILKLDMSVNNFSASIPPEIGNCLLLTYLDLSQNQLSGPVPVQLSQIHIMNYLNVSWNHLNQGLPKELGAMKGLTSADFSHNDFSGSIPEEGQFSVFNSTSFMGNPQLCGYELNPCKHSSNAVLESQDSGGARPGVPGKYKLLFAVALLACSLAFATLAFIKSRKQRRHSNSWKLTTFQNLEYGSEDIIGCIKESNVIGRGGAGVVYHGSMPNGEQVAVKKLLGINKGCSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYDYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPGTWF	784

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed3g2393	784	SUPERFAMILY	L domain-like	37	307	-	-
	Aed3g2393	784	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3	9	267	-	-
	Aed3g2393	784	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3	266	781	-	-
	Aed3g2393	784	Pfam	Leucine Rich Repeat	247	266	IPR001611	GO:0005515
	Aed3g2393	784	PANTHER	UNNAMED PRODUCT	9	267	-	-
	Aed3g2393	784	PANTHER	UNNAMED PRODUCT	266	781	-	-
	Aed3g2393	784	SUPERFAMILY	L domain-like	231	535	-	-
	Aed3g2393	784	Gene3D	Transferase(Phosphotransferase) domain 1	686	783	-	-
	Aed3g2393	784	SMART	serkin_6	608	784	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aed3g2393	784	SUPERFAMILY	Protein kinase-like (PK-like)	602	780	IPR011009	-
	Aed3g2393	784	Gene3D	Ribonuclease Inhibitor	32	189	IPR032675	-
	Aed3g2393	784	ProSiteProfiles	Protein kinase domain profile.	608	784	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aed3g2393	784	Pfam	Leucine rich repeat N-terminal domain	35	73	IPR013210	-
	Aed3g2393	784	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	730	742	IPR008271	GO:0004672\|GO:0006468
	Aed3g2393	784	Gene3D	Ribonuclease Inhibitor	234	536	IPR032675	-
	Aed3g2393	784	Gene3D	Ribonuclease Inhibitor	190	233	IPR032675	-
	Aed3g2393	784	Gene3D	Phosphorylase Kinase; domain 1	576	685	-	-
	Aed3g2393	784	Pfam	Protein kinase domain	610	780	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed3g2393	Aed-Chr3	26878440	26881082	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed3g2393	82	780	Receptor kinase-like Gene Family	AT5G65700	51.102	0.0	684

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Aed3g2393		Pkinase	2.4e-32	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed3g2393	-		-	gmx:100816158	1049.65