Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2388 ATGGACGGCAGGAGTAGCTGTTATTTCATCAGGTCTTGGTCTAGCCTTTGTAGAAATCATGATGCAGTTAACTTGGCTTTTGTGGAGAAGTTGTCACCACCACCGTGCTTTGACAGGGAAGACAAACTCAAACTCATTGCTCAAACTCCAACTCATTATGAGGACTATGTTAAGGCAACATTTTCCTTTGGAAGAGATGATATTGAAGGCATGAAAAAATGGGTGCTGAATCAGTTGGAAGAAAACGATGAATTGATGAAAGCACCGCAATATTTATCAAAGTTTGTGATTACGTGTGGTTTCATGTGGGCTAGTTGGGTTAAAGCGAAATATAAACATGATGAGGAAGATGAACAAGAGATGGAAGAGGAGTACTTTCGTTTTGCAGCAGATTGTAGAAATCGCTTTGAGTACCCTATACCAGCAATGTACTTTGGAAATTGCCTAACGAGATGTCATGCATTGCTCAAGAGAAAGGAGCTAATGGGAGAAGGTGGTTTTGTGAACGCAGTGAAGTGCATTGCAAGGGAAATAACTGATATGAAAACTGAGCCTCTTAAAGGTGCAGAAAAGTGGAAGGAATTGAATAGGAAAATGTTTGTATCGGTAAGTACGATGCTAGTTGGAGGGTCACCTAAGTTTGCTGTTTATGAGACCGATTTTGGATTTGGAAGACCTACCAAAGTGGAGATGCTGATACATCCCCGAATATTGTGTGTCTCTCTTGCCGAAAGTGGAGACAGAAGATGGGATAGAGCTTGGTTTCGTATTTAG 774 0.4109 MDGRSSCYFIRSWSSLCRNHDAVNLAFVEKLSPPPCFDREDKLKLIAQTPTHYEDYVKATFSFGRDDIEGMKKWVLNQLEENDELMKAPQYLSKFVITCGFMWASWVKAKYKHDEEDEQEMEEEYFRFAADCRNRFEYPIPAMYFGNCLTRCHALLKRKELMGEGGFVNAVKCIAREITDMKTEPLKGAEKWKELNRKMFVSVSTMLVGGSPKFAVYETDFGFGRPTKVEMLIHPRILCVSLAESGDRRWDRAWFRI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2388 257 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 40 - -
Aed3g2388 257 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 42 248 - -
Aed3g2388 257 Pfam Transferase family 1 234 - -
Aed3g2388 257 PANTHER - 42 248 - -
Aed3g2388 257 PANTHER - 1 40 - -
Aed3g2388 257 Gene3D - 53 253 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2388 Aed-Chr3 26828016 26828916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2388 2 226 Monolignol Biosynthesis Gene Families AT5G48930 21.633 2.46e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2388 - - gmx:100801403 380.563