Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2380 ATGGAGAATAATAATGATGTGAAACCCATAGTCCTGTTTATTCCTGGTGGCGTTGACATTGTTAATGCCATAATCAACTTCGGTCGCGAACGAGATGTTGACATCACGGTGCACCATGCTTCATGCATCATCAGTGAAGTAAACATTTGCAACCCTCTCTCCAATGATTTGCGGTTCTTGGGAAAGTTTCACATGATTTCTCTCACTGGCTTTTACACCAACAACAACAATAACAATCCATATTCATCGTTTGCAATTCAATTCACGAGAGGAAACCCTCCCAAACTCTTTGGAGGCGTTATTGGAGGCAAGCTTGTTAGTGCAGAACCTCTGCATGTCATGGCCTCTATCGTGAGTACCACAAGGTGA 369 0.4309 MENNNDVKPIVLFIPGGVDIVNAIINFGRERDVDITVHHASCIISEVNICNPLSNDLRFLGKFHMISLTGFYTNNNNNNPYSSFAIQFTRGNPPKLFGGVIGGKLVSAEPLHVMASIVSTTR 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2380 122 Pfam Plants and Prokaryotes Conserved (PCC) domain 8 116 IPR005175 -
Aed3g2380 122 Gene3D - 5 121 - -
Aed3g2380 122 ProSiteProfiles PPC domain profile profile. 4 122 IPR005175 -
Aed3g2380 122 SUPERFAMILY AF0104/ALDC/Ptd012-like 5 114 - -
Aed3g2380 122 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 2 119 - -
Aed3g2380 122 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 119 IPR014476 GO:0003680
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2380 2 116 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 26.016 3.61e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2380 - - gmx:102666204 115.161