Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2356 GTTTCATTTCACATAGGAACAACAAAGAAACACTGTTTCGTATTTTCTTTCATTCGGCGGCGTAGAAGCAAAGGAGGGAGAGGAAGAAAAAGTTGCTACCAACAAACACACACAGTGCTTTATTCCGCGGTGGCGACAACTGACCTAAGCGGCGAAGGAGAGGCGCGGAACGGTCGTCTTCAGGGTTTTCTGTCGTCGCTGTTCTCCACTCTCGGTGGTGTTTTCGGCTCAACTTTTCAAGAACCGCAACCACACGTTGTTATCATGGCTTCCAGAGTGCAGGATCAACCCATCAATGTTGGTGAGAATAAGCAGAAGATCATGGGTGGTGAAGGAAGAAACAGAAGGGTGTTGCAGGATATTGGGAATCTTGTGGGTAAACAAGGGCATGGAGTCAATGTATCTAAGCCTGTCACAAGGAACTTTCGTGCTCAATTATTGGCCAATGCACAAGTCCTACCAGAGAAAACCAAGAAGTCAAGCACTGAAGTGGTGGCAAATGATGGGGTTGGTGTTGGGAATTTTGTTCCTGCTAGAAAGGTGGAAGTAGCTAAGAAGCCTAAAGAAGAACCTCAAGTGATTGTCATTAGCTCTGATGATGAATCGGAAGTAAAGGAGAAGCAAGCTTTTAAGGAAAGAAAGGCAAAGGAGAAGTTTGCCAGGAAGAATGCCAAGGCCTTCAGTTCAGTCCTCTCTGCTCGAAGCAAGGCTGCTTGTGGACTCCCAAGGGATTTGGTAGTGAACATCGATGAAACTGACATGGACAATGAATTGGCAGCAGCAGAGTATATTGATGATATATATCAATTCTATAGAGAGACTGAAAAAGATGGCTGTGTGCATGACTACATGGCTTCGCAGCCAGATATTAATGCCAAGATGAGATCAATCCTTGTGGACTGGTTGATAGAAGTGCATAGGAAGTTTGAGCTCATGCCAGAAACTCTATATTTGACCCTCAACATTGTTGATCGGTTCCTGTCTGTGAAGGCCGTGTCTAGAAGGGAACTTCAGCTGGTTGGCATCAGCTCAATGCTGATAGCCTCAAAATATGAAGAGATATGGGCACCAGAGGTTAATGACTTTGTGTGCATATCAGACAATGCTTATGTTAGTTCACAATTGTTGATTATGGAGAAAACAATTCTTAGGAAGCTTGAATGGTACTTAACAGTTCCAACACCATATGTCTTCTTGGTTAGGTACATCAAAGCCTCCACTCCATCTGACAAAGAGATGGAAAACATGGTGTTTTTCCTTGCTGAACTTGGATTGATGCATTATCCTACTGTAACCTTGTACTGCCCTTCTCTGATTGCTGCTTCTGCTGTGTTTGCGGCTCGATGTACTCTTGGAAGGAGCCCTTTTTGGACAAGCACTTTGAAGCACTACACAGGCTACTCTGAGGAGCAACTAAGGGATTGCGCCAAAATCATGGTCAACCTTCATGCTGATGCTCCAGGAAGTAAGCTTAAGGCAGTTTTCAAGAAATTCTGTAGCTCGGATCTTTGTGCTGTTGCTCTTCTTTCTTCAGCGAAGGACTTGTCAGCACTGTCTTGA 1560 0.4449 VSFHIGTTKKHCFVFSFIRRRRSKGGRGRKSCYQQTHTVLYSAVATTDLSGEGEARNGRLQGFLSSLFSTLGGVFGSTFQEPQPHVVIMASRVQDQPINVGENKQKIMGGEGRNRRVLQDIGNLVGKQGHGVNVSKPVTRNFRAQLLANAQVLPEKTKKSSTEVVANDGVGVGNFVPARKVEVAKKPKEEPQVIVISSDDESEVKEKQAFKERKAKEKFARKNAKAFSSVLSARSKAACGLPRDLVVNIDETDMDNELAAAEYIDDIYQFYRETEKDGCVHDYMASQPDINAKMRSILVDWLIEVHRKFELMPETLYLTLNIVDRFLSVKAVSRRELQLVGISSMLIASKYEEIWAPEVNDFVCISDNAYVSSQLLIMEKTILRKLEWYLTVPTPYVFLVRYIKASTPSDKEMENMVFFLAELGLMHYPTVTLYCPSLIAASAVFAARCTLGRSPFWTSTLKHYTGYSEEQLRDCAKIMVNLHADAPGSKLKAVFKKFCSSDLCAVALLSSAKDLSALS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2356 519 SMART cyclin_7 300 384 IPR013763 -
Aed3g2356 519 SMART cyclin_7 397 481 IPR013763 -
Aed3g2356 519 Pfam Cyclin, C-terminal domain 393 511 IPR004367 -
Aed3g2356 519 Gene3D - 280 391 - -
Aed3g2356 519 SUPERFAMILY Cyclin-like 255 390 IPR036915 -
Aed3g2356 519 CDD CYCLIN 391 480 IPR013763 -
Aed3g2356 519 Pfam Cyclin, N-terminal domain 266 390 IPR006671 -
Aed3g2356 519 SMART Cyclin_C_2 393 512 IPR004367 -
Aed3g2356 519 CDD CYCLIN 294 383 IPR013763 -
Aed3g2356 519 PIRSF Cyclin_A_B_D_E 83 519 IPR039361 -
Aed3g2356 519 PANTHER CYCLINS 106 513 IPR039361 -
Aed3g2356 519 SUPERFAMILY Cyclin-like 394 513 IPR036915 -
Aed3g2356 519 ProSitePatterns Cyclins signature. 295 326 IPR006671 -
Aed3g2356 519 Gene3D - 266 507 - -
Aed3g2356 519 PANTHER CYCLIN-B1-4 106 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2356 Aed-Chr3 26585807 26588496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2356 172 516 Core Cell Cycle Gene Families AT2G26760 57.821 2.58e-142 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2356 K21777 - gmx:547782 679.093