Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2330 ATGGAGATTTTGAGATTCAAGAAAATGGTGTTGATGATGATACTGACAATGATGTTGGTAAACATGGCTAAATCAGAGCTTCACGACGTTGGAGGCAACAAGACTACTTGGGCACCCAATATTAACTTCACAGAATGGTCAAGTCATGAGCACTTCCATTTGGAAGATTGGCTTTACTTTGGATATGATAGGCACAGGTACAATGTACTAGAGGTGAACCAGACTAGAAGAGAGGTGTTTCAAATACTAGAGTTCAAGACCTACTACTTCTTAAGTGGTGGAGGCTTTTGTTGGGATGGGATGAAGGTTGCTATAACCGTTACTGAAGGTGCTGTTGCACCTTCACCAGAACAAAGAGGTGCACCAGTTCCAGCACCTTCAACAAAGAGTGGTGCTCCTGCTCCAGCACCTTCACCAAAAACTAGTTCTGCTTCTTATGGCATTCATGTCAACCATATACTTAAAGTGTTCATTTTTGTGTTCATTTGGGGTATCTCTTTAGGTAACATCAGTTACTAA 519 0.4143 MEILRFKKMVLMMILTMMLVNMAKSELHDVGGNKTTWAPNINFTEWSSHEHFHLEDWLYFGYDRHRYNVLEVNQTRREVFQILEFKTYYFLSGGGFCWDGMKVAITVTEGAVAPSPEQRGAPVPAPSTKSGAPAPAPSPKTSSASYGIHVNHILKVFIFVFIWGISLGNISY 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2330 172 Gene3D - 24 110 IPR008972 -
Aed3g2330 172 SUPERFAMILY Cupredoxins 27 107 IPR008972 -
Aed3g2330 172 Pfam Plastocyanin-like domain 37 75 IPR003245 GO:0009055
Aed3g2330 172 PANTHER EARLY NODULIN-LIKE PROTEIN 20 77 115 - -
Aed3g2330 172 PANTHER EARLY NODULIN-LIKE PROTEIN 20 9 76 - -
Aed3g2330 172 MobiDBLite consensus disorder prediction 114 138 - -
Aed3g2330 172 PANTHER BLUE COPPER PROTEIN 77 115 IPR039391 GO:0009055
Aed3g2330 172 PANTHER BLUE COPPER PROTEIN 9 76 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2330 Aed-Chr3 26437907 26438702 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2330 9 145 Phytocyanin Superfamily AT2G27035 35.714 2.27e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2330 - - gmx:100812663 212.616