Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2327 ATGCAGGAGATGGCTTCTCCTGGGCCAAATGGAACTGAGAGTGAGGATTCCTTGCCTCCTCCGCCTCCCATTGTCCCTGCAGATGTTGTACCTATCAAAGCTGAGCCGGAGAAGAAAAAGCCTTTAAGGCTTCCAATGGCCAGACGTGGCCTTGCTTCGAAAGGGATGAAGCTGCAACTTCTCACCAACCACTACAGAGTGAATGTTGCAAACACTGACGGACATTTTTATCAGTATAGTGTTGCTCTTTCTTATGAAGATGGACGACCCGTGGAGGGTAAGGGTGTAGGGCGGAAGCTGCTGGACAGGGTGCATGAAACGTATGATTCTGAATTGAATGGGAAGGATTTTGCATATGATGGTGAGAAGACTCTGTTTACTCTTGGGACTCTTGCTCGCAACAAGCTTGAGTTTACTGTTGTTCTGGAGGATGTCATTGCAAGCAGAAATAATGGGAACTGCAGTCCAGAGGGAAATGGAGAAGCAAATGAGAGTGATAAAAAGAGGATGAGGCGCCCTAATAGATCTAAGACCTTTAAAGTTGAGCTTAGCTTTGCTTCAAAGATTCCATTACAGGCCATTGTCAATGCTCTACGAGGACAGGAATCTGAGAATTATCAAGAAGCAATACGAGTGCTTGATATCATTTTGAGGCAGCATGCTGCTAAGCAAGGCTGTTTGCTTGTAAGGCAATCGTTCTTCCACAACGATCCCAAGAATTTTGCTGATGTAGGAGGAGGTGTACAAGGATGCAGGGGTTTCCACTCTAGCTTTAGGACTACTCAAAGTGGACTGTCTTTGAACATAGATGTCTCGACCACCATGATAATTGCCCCTGGGCCTGTGGTGGACTTCTTAATATCCAATCAAAATGTGAGAGACCCCTTTTCACTTGACTGGGCAAAGGCCAAGAGAACATTAAAAAACCTGAGGATTAAAGCCAGCCCCTCTAATCAAGAATTCAAAATCACTGGGCTTAGTGAACTCCCTTGCAAAGATCAAATGTTTACATTGAAGAAAAAAGGTGGAATCAATGGTGATGATGGTACTGAGGAAGAAGTGACAGTATATGATTATTTTGTTAATATCCGCAAGATAGATCTTCGGTATTCTGGGGATCTCCCATGTGTCAACGTTGGGAAGCCCAAAAGGCCAACTTACATCCCTCTTGAGCTTTGCTCTTTGGTATCCCTTCAACGTTATACAAAAGCACTGTCCACCCTTCAAAGGTCATCATTGGTGGAGAAGTCCAGGCAGAAGCCACAGGAGAGGATGAGAGTCTTGTCTGATGCATTAAAAAGTAGCAATTATGGTGCTGAACCGATGCTTCGCAATTGTGGGATTATTATAAGCCCCAACTTTACTGAAGTTGAGGGTCGGGTTTTACAAGCTCCAAGGTTGAAATTTGGTAATGGGGAGGACTTCAATCCTAGAAATGGGAGGTGGAACTTCAATAATAAGAAAATTGTCAAGCCAACTAAAATAGAAAGATGGGCTGTGGTTAACTTCTCTGCACGCTGTGATATACGAGGGCTTGTCAGGGATCTAATTAAGTGTGGTGGATTGAAAGGAATTGTGATAGACCAGCCATTTGATGTATTTGAAGAAAATGGTCAGTTTAGGCGTGCACCACCAGTGGTTAGAGTGGAGAAGATGTTTGAGTTGGTTCAGTCTAAACTTCCTGGGGCTCCTCAGTTTCTTCTTTGTCTGCTTCCTGAAAGGAAAAATTCTGATCTTTATGGTCCCTGGAAGAAGAAGTGTCTTGCTGAGTTTGGAATTGTGACTCAGTGTATAGCTCCGACAAGGGTCAATGACCAATATTTGACTAATGTTCTGTTGAAGATCAATGCTAAGCTTGGTGGCCTGAACTCAATGTTAGGAGTTGAGCATTCTCCTTCTATTCCTATTGTTTCTAAAGTTCCAACCATCATTATTGGCATGGATGTGTCTCATGGTTCCCCGGGGCAAACAGATATTCCATCAATTGCAGCGGTGGTCAGCTCTCGAGAATGGCCTCTAATATCAAAGTATAGAGCATGTGTCCGTACCCAGTCTCCAAAGATGGAAATGATTGATAATTTGTTCAAGAAAGTTTCTGACAAGGAGGATGATGGCATAATGAGGGAACTTCTACTTGATTTCTATACAAGTTCTGGGAATAGAAAGCCCGATAATATAATCATATTCAGGGACGGTGTTAGTGAGTCCCAGTTCAATCAAGTTTTGAACATTGAACTTGATCAAATTATCGAGGCTTGCAAGTTTTTAGATGAAAAGTGGAATCCCAAATTTCTGGTGATTGTTGCTCAGAAGAACCATCATACTAAATTTTTTCAACCTGGATCTCCTGACAATGTTCCTCCTGGAACTGTAATTGATAACAAAATTTGCCACCCTCGGAATTATGATTTCTACATGTGTGCACATGCTGGAATGATTGTGAGTATCTGCTTTCTTTTTTTTTCAATTAGTAGATCCGTTAGTGTCCTCTATCCGTTGTATCAGAGGAGCACCACTGCCATTTCTGTTGTTGCTCCAATATGCTATGCTCACCTGGCTGCAACTCAGATGGGTCAGTTTATGAAGTTTGAGGACAAATCTGAGACATCTTCAAGTCATGGTGGTGGTGCTGGTATGCCTGCTCCTCCGGTTCCTCAGTTGCCAAAATTACAGGACAATGTGTCGAGCTCCATGTTCTTTTGTTGA 2706 0.4298 MQEMASPGPNGTESEDSLPPPPPIVPADVVPIKAEPEKKKPLRLPMARRGLASKGMKLQLLTNHYRVNVANTDGHFYQYSVALSYEDGRPVEGKGVGRKLLDRVHETYDSELNGKDFAYDGEKTLFTLGTLARNKLEFTVVLEDVIASRNNGNCSPEGNGEANESDKKRMRRPNRSKTFKVELSFASKIPLQAIVNALRGQESENYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVQGCRGFHSSFRTTQSGLSLNIDVSTTMIIAPGPVVDFLISNQNVRDPFSLDWAKAKRTLKNLRIKASPSNQEFKITGLSELPCKDQMFTLKKKGGINGDDGTEEEVTVYDYFVNIRKIDLRYSGDLPCVNVGKPKRPTYIPLELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLSDALKSSNYGAEPMLRNCGIIISPNFTEVEGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVKPTKIERWAVVNFSARCDIRGLVRDLIKCGGLKGIVIDQPFDVFEENGQFRRAPPVVRVEKMFELVQSKLPGAPQFLLCLLPERKNSDLYGPWKKKCLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSMLGVEHSPSIPIVSKVPTIIIGMDVSHGSPGQTDIPSIAAVVSSREWPLISKYRACVRTQSPKMEMIDNLFKKVSDKEDDGIMRELLLDFYTSSGNRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKICHPRNYDFYMCAHAGMIVSICFLFFSISRSVSVLYPLYQRSTTAISVVAPICYAHLAATQMGQFMKFEDKSETSSSHGGGAGMPAPPVPQLPKLQDNVSSSMFFC 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2327 901 Gene3D - 633 901 IPR036397 GO:0003676
Aed3g2327 901 CDD Piwi_ago-like 441 856 IPR045246 -
Aed3g2327 901 MobiDBLite consensus disorder prediction 1 28 - -
Aed3g2327 901 SUPERFAMILY Ribonuclease H-like 550 860 IPR012337 -
Aed3g2327 901 Pfam N-terminal domain of argonaute 58 217 IPR032474 -
Aed3g2327 901 ProSiteProfiles PAZ domain profile. 304 397 IPR003100 GO:0005515
Aed3g2327 901 SMART DUF1785_2 227 279 IPR014811 -
Aed3g2327 901 ProSiteProfiles Piwi domain profile. 566 862 IPR003165 GO:0003676
Aed3g2327 901 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 11 900 - -
Aed3g2327 901 CDD PAZ_argonaute_like 279 396 - -
Aed3g2327 901 Pfam Piwi domain 567 862 IPR003165 GO:0003676
Aed3g2327 901 Pfam PAZ domain 283 413 IPR003100 GO:0005515
Aed3g2327 901 Pfam Argonaute linker 2 domain 423 469 IPR032472 -
Aed3g2327 901 Pfam Argonaute linker 1 domain 229 277 IPR014811 -
Aed3g2327 901 Gene3D paz domain 273 401 - -
Aed3g2327 901 SMART Piwi_a_2 566 862 IPR003165 GO:0003676
Aed3g2327 901 MobiDBLite consensus disorder prediction 865 891 - -
Aed3g2327 901 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 11 900 - -
Aed3g2327 901 MobiDBLite consensus disorder prediction 14 28 - -
Aed3g2327 901 SUPERFAMILY PAZ domain 274 437 IPR036085 GO:0005515
Aed3g2327 901 MobiDBLite consensus disorder prediction 152 175 - -
Aed3g2327 901 Gene3D - 461 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2327 Aed-Chr3 26426316 26432792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2327 48 901 Eukaryotic Initiation Factors Gene Family AT5G43810 32.856 7.06e-142 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2327 K11593 - gmx:100779439 1657.88