Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2322 ATGCAGGCTATCTGGTTGATGCTATTGTTGTTTGTGTTTACTGCATTGGGGAATTCAGACATTGATGCACTCCTTGAATTCAAGAAGAGTATTCAGAATGACCCTTTTGGATTAGTAGTTAATTCTTGGGATTCCAGGTCCTTAGATTCCGATGGTTGTCCTAAGAACTGGTATGGGATAGTGTGTAGTGAAGGCAGTGTTATATCAATCACTCTGGACAATGCTGGTTTGGTTGGTGAGTTTAACTTCCTTGCAATTAGTGGCCTTACAATGCTTCACAATTTGTCAGCTGTGAACAACCAGTTCACAGGAGATCTCTTACATATTGCTTCAATGGAATCACTTGATTATCTTGATTTGTCCCACAACAAGTTTAATGGGCCGTTACTCTCTAACTTTGTTCCGTTGTGCAAGTTAGTATATCTGAATCTTTCTTCAAATGAACTTGGAGGTACTCTTCCTATTGAGTTTCACAAACTTGAGCAGTTGAAGTATTTAGATTTGCACATGAATAACTTCTCTGGGGATATTATGCATATATTTTATCAGATGGGCAGTGTGCTATATGTTGACTTAAGCAGCAACAGGTTTTCTGGTACACCGGATTTGGGACTTGCAGATGAGTCATTTCTCTCTTCAATTCAGTATTTAAATATTAGCCATAATTCCTTGAGTGGTGAGTTATTTGCTCATGATGGTATGCCATACCTTGACAATTTAGAGGTCTTTGATGCTAGTAATAATCAGTTAGAGGGTAATATACCTTCCTTCACATTTGTGGTATCTCTTCGGATTCTTCGACTTGCATGCAACCAGTTGACTGGTTTACTGCCCGAAGCTCTATTGAAGGAAAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCACATTAGAATTATTACCTCGGTGACTCTGAGGAAGCTTAACTTATCTTCAAACAAATTGTCTGGCCCTTTACCACTCATGGTAGGCCACTGTTCCATCATAGATTTGAGTAATAACACACTATCAGGTAATTTCTCAAGGATCCAGTATTGGGGTAACTATGTGGAAGTGGTTCAGCTAAGTACCAACTCATTGATAGGAATGCTGCCAAACGAAACTTCTCAATTTTTAAGGTTAACTGCACTCAAGGTATCCAATAACTCATTGGAGGGCTTTCTCCCACCAATTTTGGGAACATATCCAGAACTAGAAGACATTGATCTTAGCCTCAACCAGCTTTCTGGGTTCCTCCAACCAAGCTTTTTCACCTCAACCAAATTGATTAATCTTAATCTCTCCAGCAATAAATTTTCTGGATCAATTCCTATTCAATTTCAACCTCCAAATAATCCATTAGTTTCTGCTGAAAATTTTAGTCTGGTGTTTCTTGATCTTTCACACAACAACTTGAGTGGGTCTCTTCCTTCAAATATGAATAGGCTTCACAATTTGGCATATCTCAATCTATGCAACAACAAATTGGAAGGTACTATTCCTGATGACCTTCCAGATAAGTTGAGAGTATTGAATGTGTCCTTTAATAATCTTTCTGGTGTTGTACCAGAAGGCTTAAAGCAGTTTCCTGACTCAGCATTTCATCCAGGAAATATTATGCTGGTATTTCCACATTTGAAATCATCACCAAAAGATACTTCCAACCTAGGCTTGAGGGAACATCGGTTTCGTAAAAAGTCTGCAACTAGGATTGCCCTGATTGCATGTTTGGTTGCTGGTGCTTTTGTGATGGCTTTTGTGGGTATAATAATTTATTATAAGGTTCATCATGAAAAAGAAAGGACGTCTAAACAAAATGAAGCAGGAGGCATCACCCAAGAGAGTACTTTCACATCAAATATAGAGGCACCTTATAGTAATTTGGAAGCATTACCATCACAAAGGGGGTCTTCTGATGATGCAAGAAACACTCATTCAGTGGGAAAGAAGCCAATAGATCTTGGCCCTTTTGAATTAGGTAAGAATGAGGAAGGAACGTCTACCCCAATGTCTATTTTGTCACCTTCAAATCCTTCATCTTCAAAAAGCTACCAGTTTGAGAATCCTGGTTCCCTCAAAGTCTCCTCTCCAGATAAACTGGTTGGAGACTTGCATATATTTGACGGATCCTTGGTGCTAACTGCGGAAGAACTTTCATGTGCTCCAGCAGAAGTTATTGGCAGGAGCTGTCATGGAACACTCTACAAAGCTACACTTGACTCTGGTCATGAAATGGCCGTCAAATGGTTAAGAGAAGGAATAACAAAAGGAAAAAAGGAGTTGGCAAGGGAAATTAAGAAACTTGGAACTATCAAGCATCCAAACCTGGTTTCTATTCAGGGTTACTACTTGGGGCCAAAGGAACATGAGAAACTGATTATATCAAATTACATGAATGCACAATCTTTGGACATATATCTACATGAGGCAGATGAAAGAAATCTCCATCCTTTGTCTCTCGATGAAAGGCTTGGGGTGGCTGTAGAGGTGGCACAATGTCTGCATTTCTTACACGATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATTTTGCTAGAAACTCCCAACAGAAATGTCCTCCTCACTGACTACAGCCTGCACAGGATACTCACTGCTGCTGGTACAGCCGAGCAAGTTCTGAATGCCGGTGCACTAGGCTATCGGCCTCCTGAGTTTGCTAGATCAAGCAAACCATGCCCTTCCTTGACAAGTGATGTCTATGCATTTGGAGTGGTCTTGTTAGAGCTCCTAACAGGAAGAAATTCTGGAGAAATAGTATCTGGGATTCCAGGGGTGGTTGACCTCACTGACTGGGTGAGGTTCTTAGCCGAACAAGACCGTTCAAACCAGTGCTTTGATAGGTCTCTAATGGACAAGCATAATGGGGAAAGAGAAAGACCATCTAAAATTCTTGATGACATGCTAAAGGTGGCTCTTAGATGCATCCTTCCAGCATCTGATAGACCAGACATGAAAACTGTCTTTGGTGATCTCTCAACAATAAGGTAG 3015 0.4033 MQAIWLMLLLFVFTALGNSDIDALLEFKKSIQNDPFGLVVNSWDSRSLDSDGCPKNWYGIVCSEGSVISITLDNAGLVGEFNFLAISGLTMLHNLSAVNNQFTGDLLHIASMESLDYLDLSHNKFNGPLLSNFVPLCKLVYLNLSSNELGGTLPIEFHKLEQLKYLDLHMNNFSGDIMHIFYQMGSVLYVDLSSNRFSGTPDLGLADESFLSSIQYLNISHNSLSGELFAHDGMPYLDNLEVFDASNNQLEGNIPSFTFVVSLRILRLACNQLTGLLPEALLKESSMMLSELDLSQNKLEGHIRIITSVTLRKLNLSSNKLSGPLPLMVGHCSIIDLSNNTLSGNFSRIQYWGNYVEVVQLSTNSLIGMLPNETSQFLRLTALKVSNNSLEGFLPPILGTYPELEDIDLSLNQLSGFLQPSFFTSTKLINLNLSSNKFSGSIPIQFQPPNNPLVSAENFSLVFLDLSHNNLSGSLPSNMNRLHNLAYLNLCNNKLEGTIPDDLPDKLRVLNVSFNNLSGVVPEGLKQFPDSAFHPGNIMLVFPHLKSSPKDTSNLGLREHRFRKKSATRIALIACLVAGAFVMAFVGIIIYYKVHHEKERTSKQNEAGGITQESTFTSNIEAPYSNLEALPSQRGSSDDARNTHSVGKKPIDLGPFELGKNEEGTSTPMSILSPSNPSSSKSYQFENPGSLKVSSPDKLVGDLHIFDGSLVLTAEELSCAPAEVIGRSCHGTLYKATLDSGHEMAVKWLREGITKGKKELAREIKKLGTIKHPNLVSIQGYYLGPKEHEKLIISNYMNAQSLDIYLHEADERNLHPLSLDERLGVAVEVAQCLHFLHDEKAIPHGNLKSTNILLETPNRNVLLTDYSLHRILTAAGTAEQVLNAGALGYRPPEFARSSKPCPSLTSDVYAFGVVLLELLTGRNSGEIVSGIPGVVDLTDWVRFLAEQDRSNQCFDRSLMDKHNGERERPSKILDDMLKVALRCILPASDRPDMKTVFGDLSTIR 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2322 1004 Gene3D Ribonuclease Inhibitor 135 206 IPR032675 -
Aed3g2322 1004 Gene3D Ribonuclease Inhibitor 19 134 IPR032675 -
Aed3g2322 1004 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 1003 - -
Aed3g2322 1004 SMART LRR_typ_2 260 283 IPR003591 -
Aed3g2322 1004 SMART LRR_typ_2 211 231 IPR003591 -
Aed3g2322 1004 SMART LRR_typ_2 136 159 IPR003591 -
Aed3g2322 1004 SMART LRR_typ_2 482 506 IPR003591 -
Aed3g2322 1004 Pfam Protein tyrosine and serine/threonine kinase 723 996 IPR001245 GO:0004672|GO:0006468
Aed3g2322 1004 Gene3D Ribonuclease Inhibitor 456 546 IPR032675 -
Aed3g2322 1004 Gene3D Transferase(Phosphotransferase) domain 1 798 1004 - -
Aed3g2322 1004 Gene3D Ribonuclease Inhibitor 207 356 IPR032675 -
Aed3g2322 1004 ProSiteProfiles Protein kinase domain profile. 719 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2322 1004 MobiDBLite consensus disorder prediction 629 688 - -
Aed3g2322 1004 SUPERFAMILY Protein kinase-like (PK-like) 722 1000 IPR011009 -
Aed3g2322 1004 Gene3D Phosphorylase Kinase; domain 1 725 797 - -
Aed3g2322 1004 MobiDBLite consensus disorder prediction 663 688 - -
Aed3g2322 1004 Pfam Leucine rich repeat N-terminal domain 18 63 IPR013210 -
Aed3g2322 1004 SUPERFAMILY L domain-like 335 526 - -
Aed3g2322 1004 SUPERFAMILY L domain-like 19 300 - -
Aed3g2322 1004 PANTHER OS07G0626500 PROTEIN 1 1003 - -
Aed3g2322 1004 Gene3D Ribonuclease Inhibitor 357 455 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2322 Aed-Chr3 26389981 26394599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2322 237 540 Receptor kinase-like Gene Family AT3G51740 34.395 1.62e-31 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed3g2322 PK_Tyr_Ser-Thr 4.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2322 - - gmx:100781394 1802.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2322 3 26389981 26394599 Aed3g2322 3 26389981 26394599 ECH