Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2312 ATGGGAGAAGGAAGTGACCATCAAGCTATGGCAGATAATGGTAATGCTGAATCTAGTGAAGGTGGAGTTAGTAGTGCTGAAAACAACTCTGGTTCTCATGTTCAGGTTGGGGTTTCTGAGCCATATTTGGGTAGGGAATTTGATTCTGAAGATGCTGCAAAGACTTTCTACAATGAGTATGGCAAACGAGTGGGTTTCAGCTGCAAAGCTGGCCCACATGGTCGTTCCACAGCTGATGGGGCAAATATGTACCGGGAATTTGTGTGTGGCAGGGAGGATTCTAAAAGAAAGCCTACTGAAAGCTGCAATGCAATGATTAGGATTGAGCAGAAGGGTCAAAATAAGTGGGTTGTTACAAAATTTTTAAAGGATCATAGCCATTCCATGGCAAGCCTTAGTAAGGTGCATAATATTCGGCCACGTAAGCACTTTTCTAGTGTTGGAAGAACCATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCAAGTGGTGTGATGTATGTATCTATGGATAAGAATGGCATTCCCACTAAGACTATTCAGGGAATTAAGAATATTCCTGCACCTACTGCTGAAGCAAATCACCTGGTTAAGAGTCCTACAATGATGAATTATGCTGTTAGGCCACCTACTCGAAAGAGGACATTAGGGAAGGATGCTCACAACCTCCTGGAGTACTTTAAGAAAATGCAAGCTGAGAACCCTGGTTTCTTCTATGCAATGCAACTTGATGAAGATAATCATATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGACTGCTTACAGTCATTTTGGTGATGCAGTTACTCTGGACGCAACATACAGAATAAATCAATATGGAGTGCCATTTGCTCCATTCACTGGGGTAAACCATCATGGGCAGATGATTTTGTTTGGTTGTGCGCTTCTTTTGGATGATTCCGAAGCTTCTTTTGTGTGGCTTTTTAAGACATTTCTGACAGCGATGAATGACCGTCTCCCTGTCTCTATCACTACTGATCAAGACAGAGCCATACAGACAGCTGTTTCACAAGTTTTTCCTCAAACACGCCACTGTATAAGCAAATGGCATGTCTTGCGAGAAGGCCATGAAAAGTTGGCCCATGTATGCAACATGCATCCAAATTTTCAGATTGAACTTTATAACTGTATTAATCTGACGGAAACAATTGAGGAGTTTGATTCATCTTGGAATTTTATCATCAATAAATATGAACTCATGAGAAATGACTGGCTTCAGTCCTTGTACAGTGCTCGTGCTCAATGGGTTCCAGCATATTTTCGTGATTCATTTTTTGCAGCAATATCTCCTAATCAAGGATTTGATGGTTCTTTTTTTTATGGTTTTGTAAACCACCAGCCAACATTACCACTGTTCTTTAGGCAGTATGAACAAGCTCTGGAGTGCTGGTTTGAAAAAGAATTAGAATCAGATTATGAGACAACTTGTACCACCCCTGTTCTGAAGACACCTTCCCCTATGGAGAAACAGGCTGCTAATCTCTATACGCGGAAAATATTTTCAAAGTTTCAAGAAGAGCTGGTTGAAACTTTTGCTTATACTGCCAACAGAATTGAAGAAGATGGAGAAAATAGCATATTCAGGGTTGCAAAGTTTGAGGATGACCAAAAAGCTTATGTTGTTACATTAAACCTTTCTGAGTTGAGAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTATGTAGACATGTTCTAACTGTTTTTACTGTGACTAATGTACTTACATTGCCATCTCATTACATTTTAAAACGGTGGACAAGAAATGCAAAAAGCAGTGCTGGATCAGTTGAACTTGCTGGTGAATCTCATGGACACGAGTCTTTGACATCACGATATAGCAATCTTTGTTGGGAAGCCATCAAATATGCTGAAGAGGGGGCATTGACTGTGGAAACTTATGATACTGCAATTAGTTCTCTTAGAGAAAGTGGAAAGAAGATTTCTTTCATGAGGAGAAGTGTTGCCAAAGTTGCCCCACCCAGTCATCCAGTCAGTGGGACTGCTTATGATGACAGAAAATCCCCTACTTCAACAGCAGATACAAACCCTCTTTTGTGGCCATTGCAGGATGAAACAACAAGGAGTTTTAATCTTAATGATGCTAGTACTCCTGTTCAACCAGTCGATGATCTAAATTTACCGCAGATGACCCCAGTGTCTCTCCAGCGAGATGATGGTCCACCTGAAAACATGGTGGTTTATCCGTGTCTGAAATCATTGACGTGGGTAATGGAGCACAAGAACTCAACACCAGGGAATAGAGTAGCTCTTATCAATCTTAAGTTGCAAGATTATAGCAGGAATCCTTCAACAGAATCAGACGTTAAGTTTAATCTCTCAAAAGTTACCTTGGAACCATTGTTTAACCATATGGTCAACATCAGTGATCAGCTCTCTTTACCAACTAGGAAGTTTGCGGTATTGAATCTCAAGCTTCCAGTTGCCGAGACAGCTTCTGGTGCATCTGAAGTTAAGTTTCAGGTGTCCAAGGACACATTGGGTGCTGTACTACGATCAATGGCCTATATCCGCGAGCAACTCTCGGGTCCTGGTGATCCACTGACAGAACCTGTGTCAAAAAGGCCTCGGAAGTGA 2631 0.4147 MGEGSDHQAMADNGNAESSEGGVSSAENNSGSHVQVGVSEPYLGREFDSEDAAKTFYNEYGKRVGFSCKAGPHGRSTADGANMYREFVCGREDSKRKPTESCNAMIRIEQKGQNKWVVTKFLKDHSHSMASLSKVHNIRPRKHFSSVGRTMPETYQGVGLVPSGVMYVSMDKNGIPTKTIQGIKNIPAPTAEANHLVKSPTMMNYAVRPPTRKRTLGKDAHNLLEYFKKMQAENPGFFYAMQLDEDNHMSNVFWADARSRTAYSHFGDAVTLDATYRINQYGVPFAPFTGVNHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDRLPVSITTDQDRAIQTAVSQVFPQTRHCISKWHVLREGHEKLAHVCNMHPNFQIELYNCINLTETIEEFDSSWNFIINKYELMRNDWLQSLYSARAQWVPAYFRDSFFAAISPNQGFDGSFFYGFVNHQPTLPLFFRQYEQALECWFEKELESDYETTCTTPVLKTPSPMEKQAANLYTRKIFSKFQEELVETFAYTANRIEEDGENSIFRVAKFEDDQKAYVVTLNLSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSSAGSVELAGESHGHESLTSRYSNLCWEAIKYAEEGALTVETYDTAISSLRESGKKISFMRRSVAKVAPPSHPVSGTAYDDRKSPTSTADTNPLLWPLQDETTRSFNLNDASTPVQPVDDLNLPQMTPVSLQRDDGPPENMVVYPCLKSLTWVMEHKNSTPGNRVALINLKLQDYSRNPSTESDVKFNLSKVTLEPLFNHMVNISDQLSLPTRKFAVLNLKLPVAETASGASEVKFQVSKDTLGAVLRSMAYIREQLSGPGDPLTEPVSKRPRK 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2312 876 MobiDBLite consensus disorder prediction 682 696 - -
Aed3g2312 876 MobiDBLite consensus disorder prediction 1 35 - -
Aed3g2312 876 ProSiteProfiles Zinc finger SWIM-type profile. 548 584 IPR007527 GO:0008270
Aed3g2312 876 MobiDBLite consensus disorder prediction 11 35 - -
Aed3g2312 876 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 30 802 - -
Aed3g2312 876 Pfam FAR1 DNA-binding domain 55 129 IPR004330 -
Aed3g2312 876 SMART 26again6 559 586 IPR006564 GO:0008270
Aed3g2312 876 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 802 IPR031052 GO:0006355
Aed3g2312 876 MobiDBLite consensus disorder prediction 670 696 - -
Aed3g2312 876 Pfam MULE transposase domain 270 361 IPR018289 -
Aed3g2312 876 Pfam SWIM zinc finger 548 582 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2312 Aed-Chr3 26347345 26351977 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed3g2312 MULE 3.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2312 - - gmx:100807296 1637.08