Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2283 ATGGAACTCAAAAAATTACTGCTGTTCTTTATGTTGTTGCTGGAGTATGTTTGTTGCAATAATGTGGAATCCAAGTGTGTGAAGGGATGTGATGCAGCTTTAGCTTCCTACTATGTCAGTCCAGGGTATTTACTCTTGGAAAACATAACGCGCTTGATGGAATCAACCGTTCTGTCCAATTCTGATGCTATCATAAGCTACAACAAAGACAAAATATTCAATCAAAATGTTCTATCTTTTTCCAGAATCAACATTCCATTCCCCTGTGATTGTATTCATGGTGAGTTTCTGGGGCATGTGTTTGAGTACTCAGCTTCTGCAGGTGACACCTATGATTCCATTGCCAAAGTGACATATGCCAGTCTCACCACTATTGAGCTTTTGCGGAGGTTCAACACTTATGATGACCAAAATGGTATATCAGCAAATGCAAAGGTTAATGTCACAGTCAATTGTTCTTGTGGGAACAGCCAGGTTTCAGAAGATTATGGTCTGTTTATTACCTATCCACTCAGGCCTGGGAATAATTTGCATGATATCGCCAACGAGTCTCGTCTTGATGCACAGTTGCTACAGAGTTACAATCCTGGTGTCAATTTCAGCAAAGAGAGTGGGATTATCAACATGGAGACTTTGTTCCCTTGTATCCTAGGTCTAGCTAGGAGTGCTTCTGTTGGAATATCTATAGCAGCAATATGCGGTTTTCTAATATTAGTAATCTGCATATATGTTAAGTACTTCCAGATGAAGGAAGGAGATAAAGCTAAATTGCCAACAGAAAATTCTATGGCGTTTTCAACTCAAGATGGTACGGCCTCTGGAAGTGCAGAATATGAAACTTCAGGATCCAGTGGGACTGCTACTGCTAGGTGGATAGACAAGTTCCTGCTTTTTATGCCATTTCAGAAAACTGCAATTAAGAAGATGGATGTGCAAGCATCGACAGAATTTCTTTGCGAGTTGAAGGTCTTAACACACGTTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGCGTTGAGGGATCTCTTTTCCTTGTATATGAATACATTGACAATGGAAACTTAGACCAATATTTGCATGGTACAGGGAAAGATCCTTTGCCATGGTCTAGCAGAGTGCAAATTGCGCTAGATTCAGCAAGAGGCCTTGAATATATTCATGAGCACACTGTGCCTGTGTATATCCATCGCGATGTAAAATCTGCAAATATATTAATAGACAAAAACATCCGTGGAAAGGCTAAACGTCTAAACCATGTATACTTTAAAATTCAGGTTGCAGATTTTGGTTTGACCAAACTTATTGAAGTTGGAGGCTCTACACTTCACACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGACGTTTCTCCAAAGGTAGATGTATATGCTTTTGGAGTTGTCCTTTATGAACTTATTTCTGCAAAGAATGCTGTTCTAAAGACAGGTGAATCTGTTTCTGAATCAAAGGCCCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAGAGTAATCCTTCAGAAAGTATTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTATCCAATTGATTCAGTTCTAAAGATTGCTCAACTTGGGAGAGCTTGTACAAGAGATAATCCACTACTACGCCCAAGTATGAGGTCTCTAGTTGTTGCTCTTATGACACTTTCATCACCTACTGAGGATTGCGATGATGACACTTCCTACGAAAATCAAACTCTCATAAATCTACTGTCTGTGAGATGA 1773 0.3988 MELKKLLLFFMLLLEYVCCNNVESKCVKGCDAALASYYVSPGYLLLENITRLMESTVLSNSDAIISYNKDKIFNQNVLSFSRINIPFPCDCIHGEFLGHVFEYSASAGDTYDSIAKVTYASLTTIELLRRFNTYDDQNGISANAKVNVTVNCSCGNSQVSEDYGLFITYPLRPGNNLHDIANESRLDAQLLQSYNPGVNFSKESGIINMETLFPCILGLARSASVGISIAAICGFLILVICIYVKYFQMKEGDKAKLPTENSMAFSTQDGTASGSAEYETSGSSGTATARWIDKFLLFMPFQKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLDQYLHGTGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNIRGKAKRLNHVYFKIQVADFGLTKLIEVGGSTLHTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKNAVLKTGESVSESKALVALFEEALNQSNPSESIRKLVDPRLGENYPIDSVLKIAQLGRACTRDNPLLRPSMRSLVVALMTLSSPTEDCDDDTSYENQTLINLLSVR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2283 590 ProSiteProfiles Protein kinase domain profile. 263 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2283 590 SUPERFAMILY Protein kinase-like (PK-like) 302 562 IPR011009 -
Aed3g2283 590 Pfam Protein tyrosine and serine/threonine kinase 303 560 IPR001245 GO:0004672|GO:0006468
Aed3g2283 590 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 5 590 - -
Aed3g2283 590 SMART serkin_6 278 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2283 590 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 5 590 IPR044812 GO:0019199|GO:0045087
Aed3g2283 590 Gene3D Transferase(Phosphotransferase) domain 1 352 585 - -
Aed3g2283 590 Gene3D Phosphorylase Kinase; domain 1 298 351 - -
Aed3g2283 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2283 Aed-Chr3 26170614 26174621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2283 1 590 Receptor kinase-like Gene Family AT3G21630 47.500 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed3g2283 PK_Tyr_Ser-Thr 4.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2283 - K13429 gmx:100792559 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2283 3 26170614 26174621 Aed3g2283 3 26170614 26174621 ECH