Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2282 ATGGAACACAGTTTCAGATTATCAGTTATCTTCTTGCTATGGGCCTCTATAGCGTTTAGTGCAGAATCCAAGTGTGAACCGGGTTGTGATTTAGCTCTAGCTTCCTACTATCTAATAGAAGGTGACTTGACACACATATCAAACCTTATGGAATCTCAGATTGTTTCAAAACCTGAAGATATTCTCAGCTACAACACTGACACCATAAAAAACAAAGACCAGATTCCATCCCTCACCAGAGTGAACGTTCCATTCCCTTGTGAATGCATTCGTGAAGAGTTTCTTGGCCATATATTCCAATACAGCCTTGCAGCAGGAGACACTTACACATCCATTGCCACTCAGAAATATTCCAATTTGACCACTGCTGAGTGGTTGGAGAGCTTCAACGACTATTCACCAACTGCTATTCCAGATAGCGGGACTCTTAATGTTTCCATTAACTGTTCCTGCGGGAATAGTGATGTTTCTAAGGATTATGGATTGTTCATCACATACCCTCTTAGACCTGAGGATTCTCTGCAGTCGATTGCCAACCAGACTGGGGTTGAGAGTGACTTGCTGCTTAAGTACAATCCGGGTGTAAATTTTAGCCAAGGGAGTGGTCTGGTTTATATTCCAGGAAAAGACCAAAATGGCATCTATGTGCCCCTTCATCTAAGCTCTGAAGGTCTTTCGGGTGGTATTATTGCTGGAATATCTGTTGGAGTAGTAATAGGGCTTCTGCTATTGGCATTTTGTGTGTATGTTACATATTACCGAAGAAAGAAGTTAAGGAAGGAGAGTTCGCTCTTGGAAGAATCCAAAATGAACTCTGCTAGAGTTAAGAATGTCCCTCTTTCAGATGAAGCCTCTGGTGATCCTGCCGCAGAAGGTGTTATAATGAAGTTCTCTCTAATTACACAGAAAGCTGCAATAAAAAAGATGGACATGCAAGCAACAAGAGAATTTCTTGCTGAACTGAAAGTGTTGACACGAGTTCATCACTTGAACCTGGTGCGCTTGATTGGATATTGTGTTGAGGGATCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAGGACAACATCTACGTAAATCAGGTTTCAATCCCTTGCCATGGTCTACCCGAGTTCAAATTGCTATGGATTCAGCCAGAGGTCTCCAATACATTCATGAGCATACGGTGCCTGTATATATCCATCGTGACATAAAGTCTGAAAATATTTTAATAGACAAAAACTTCTGTGCAAAGGTTGCAGACTTTGGATTAACCAAGTTGATTGATGTTGGAAGTTCCTCACTTCCCACTGATAATATGAAGGGCACATTTGGTTACATGCCACCCGAATATGCATACGGCAATATTTCTCCCAAAATAGATGTATATGCCTTTGGAGTTGTTCTTTATGAACTAATTTCTGGTAAAGAAGCATTGATCAGGGGTGGTGCATCTGGTGCTGAATTAAAGGGCCTTGTATCTTTGATGGCACAACTTGCGAGAGCATGCACAGAGAGCGATCCACTACAACGTCCAAATATGAGTTCTGTTGTCGTTACTCTCACAGCACTCACTTCTACTACTGAGGATTGGGACATTGCTTCTATAATTGAAAATCCAGCTCTTGCAAATCTAATGTCTGGGAAATAG 1638 0.4127 MEHSFRLSVIFLLWASIAFSAESKCEPGCDLALASYYLIEGDLTHISNLMESQIVSKPEDILSYNTDTIKNKDQIPSLTRVNVPFPCECIREEFLGHIFQYSLAAGDTYTSIATQKYSNLTTAEWLESFNDYSPTAIPDSGTLNVSINCSCGNSDVSKDYGLFITYPLRPEDSLQSIANQTGVESDLLLKYNPGVNFSQGSGLVYIPGKDQNGIYVPLHLSSEGLSGGIIAGISVGVVIGLLLLAFCVYVTYYRRKKLRKESSLLEESKMNSARVKNVPLSDEASGDPAAEGVIMKFSLITQKAAIKKMDMQATREFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIENGNLGQHLRKSGFNPLPWSTRVQIAMDSARGLQYIHEHTVPVYIHRDIKSENILIDKNFCAKVADFGLTKLIDVGSSSLPTDNMKGTFGYMPPEYAYGNISPKIDVYAFGVVLYELISGKEALIRGGASGAELKGLVSLMAQLARACTESDPLQRPNMSSVVVTLTALTSTTEDWDIASIIENPALANLMSGK 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2282 545 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 292 491 IPR044812 GO:0019199|GO:0045087
Aed3g2282 545 ProSiteProfiles LysM domain profile. 164 218 IPR018392 -
Aed3g2282 545 SUPERFAMILY Protein kinase-like (PK-like) 297 517 IPR011009 -
Aed3g2282 545 Gene3D Transferase(Phosphotransferase) domain 1 290 537 - -
Aed3g2282 545 ProSiteProfiles Protein kinase domain profile. 264 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2282 545 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 4 286 IPR044812 GO:0019199|GO:0045087
Aed3g2282 545 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 492 545 IPR044812 GO:0019199|GO:0045087
Aed3g2282 545 PANTHER LYSM RECEPTOR KINASE 1B 492 545 - -
Aed3g2282 545 PANTHER LYSM RECEPTOR KINASE 1B 292 491 - -
Aed3g2282 545 PANTHER LYSM RECEPTOR KINASE 1B 4 286 - -
Aed3g2282 545 SMART serkin_6 292 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2282 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Aed3g2282 545 Pfam Protein tyrosine and serine/threonine kinase 302 514 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2282 Aed-Chr3 26164012 26169601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2282 12 545 Receptor kinase-like Gene Family AT3G21630 49.673 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed3g2282 PK_Tyr_Ser-Thr 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2282 - K13429 gmx:100803042 858.211