Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2261 ATGAATGAAAATGGATCTTTGGAGGAACTTGATGTGAGTGGGACTGCCATAAGACAAATTACTACATCCAAAGTTTTTTTGGAAAATCATAAAGAACTCTCTTCTGGTGGAACGAAAGAACTATCATACAACGCATCATATCAAAGGATTTCAATGCGTAGGAGGCAACTAGTTCTGAAGGATTTCATCTTGCCTACTCTCTCCTGCTTAATAAGCTTGAAATTCTTGAATTTAAGTTATTGTGACCTTAATGATGAATCAATTCCAGATGGTGTAGGATCCTTATCATCTTTGTTGGGCTTAGATCTAAGCGGGAACAATTTTATTAGTCCACCTACTCATTGCATTAGTAATCTTCATACCCTGCAGAGTTTGACATTGATTGATTGCCCAAGGCTTGAGTCTTTGCCTATGCTTCCACCAAATGCTCAATGCTTGTGTACAACTAATAGTACTCAAATGAAACCCTTGAATTCAGATGCATATATGCTTTGGAAGATCTATGAGTTACATATGAAGCAGACATACTTTTTATATACTCCTCATTCTCTCCCTCCTCTGCCCCTTGCCCACCCTAATTATTTCCATAAAGTTTGTGTTTACCAAATGGAAGATAGGCCACATTTTTTGTTCTTCATTCCGGGGATAGAAATTCAAAAGTGGAATGAACATTGTTTTCTAATTGATCCATCACACCATCCATATAACATGTTGCTGTTGGGTTCTGATTCAGTGGCATCAATAATGGTAGATGTACCTAACTACTGTGGGTCTAGTGGATGGTTAGGAATTGCAATATGCCTAGCATTAGAACCTTCAAATATGCAGCACTCTTCTGCATCACATATGAGTCCAGATTCCATGGGAAATGAGGAAACGTGCATTTATTATTGGGCATGTAAAGCTCCTGATGGTGAACCTGACTTGACTTTCCCCATAGGACCTAAATTTAGCCACTTAGTTCATGAATGCAATGAAGAGAAATGCCTACTTCAATTGATATTTTATGTGGAAAATCATTCTAAGCCATGGAAGCCAAGAATAAAGAAGTGTGGGTGTCGTGTTATATTTAAGGAAGAATGGAAGATGTTCAAGATTGGTGCAAGCAATCAAGTGGTCCCAGCTTTTGCAAAGCTGAAGTTCATTGATTTGAGCTATTCAGAAGATCTAATTCAAACTCCTATAGTTTCTGGCGCTCCATGTCTTGAAAGATTGCTTCTTATGGGTTGTATAAACCTTGTTGAGGTTCACCCATCAGTTGGACAGCACAAGAGACTTGTTGTATTGTTCATGAAAAATTGCAAAAATCTTGAAATCATGCCAAGAAAATTGGAGATGGATGCTTTGGAGGAATTGATTCTTTCTGGCTGCTCAAAAGTTAAAAAACTGCCAGAATTTGGAAAGAGTATGAAATCCTTATCACTGCTTAGTGTAGAGAGTTGCACAAATCTTCTTTGCCTACCAAACTCTATTTGCAATTTGAAATCTCTTAGAAAACTCAACATGTCTGGCTGCTCAAGATTGTCAACATTGCCTGATGGTTTGAATGAAAATGAATCTTTGGAGGAGCTTGATGTGAGTGGCACTGCAATAAGAGAAATTACTTTATCTAAAGTTCGTTTAGAAAAACTTAAAGAGCTCTCCCTTGGGGGACAGAAAGAACAAGAACTAGCACCCAACTCACAAAACTTACCTATATGGATCTCCAAGTTTATGAGGCAACCAGATATGAAGGAGTCAATTGTGCCTCCTCTTTCCAGCTTACTTGCCTTGGTGTCCTTGGATTTAAGTTACCGTGACCTTAATGATGAATCATTTCCCAGTGATCTCGGTTCTTTATCATCGTTGCAGGAGTTAGATCTAAGTGGTAACAATTTTGTTAACCCACCTGCCCAGTGCATTATTAATCTTTCTATGTTGCAGATTTTGTCCTTCAATGATTGCCCAACACTTGAATCCTTGCCAATGCTTCCACCAAATTTACAAGGCTTGTATGCAAATAATTGTCCTAAATTGAAACCCTTTAATTTGGATGAAGAAACGCTATGGAAAATATTTGAGACACAATCACATATGGATCCGGATTGCCAGTTAAGTGAATGGTGGGGAATTGCAGTGTGCTTAGCATTTGAACCTTTAATAAATATGGAGGAGGATTCATCTCCATCTTATGTGAAACCAACTTCCACTGGCAATTTTTATTATTGGGTCTGTAAAGCTCCTGATCAAGACCCTGACCCAATGTTTCCTATAGCATCCAAGTTTGGACACTTGGTTTATAAATTCAATGACCCTTACATCCATATTATATTCTTGACTGCTGATCATGTATACATTCAGCATTATCTAAGTGGGGAGCAAACCCAACTCCAATTGATATTTTTTGTGGAGAATCGTTCTAAGTCATGTAAGGCAACAATAAAAAAGTGTGGGTGCCGTGTTATATGTAAGGAAAAAATTGAAGAATGGCGCAAGCACTCAGATGGTCTTATTACATCAAGATTCACAGAAATGAATGATGATGTGGAATTCCGTCATGAATTTGAGGTGGAGGTGCCTACTTCTCCAAATACATCCTCTTCAATGGACAAAACTGCAGTAAACACTAACCTTGGTAAATGA 2622 0.381 MNENGSLEELDVSGTAIRQITTSKVFLENHKELSSGGTKELSYNASYQRISMRRRQLVLKDFILPTLSCLISLKFLNLSYCDLNDESIPDGVGSLSSLLGLDLSGNNFISPPTHCISNLHTLQSLTLIDCPRLESLPMLPPNAQCLCTTNSTQMKPLNSDAYMLWKIYELHMKQTYFLYTPHSLPPLPLAHPNYFHKVCVYQMEDRPHFLFFIPGIEIQKWNEHCFLIDPSHHPYNMLLLGSDSVASIMVDVPNYCGSSGWLGIAICLALEPSNMQHSSASHMSPDSMGNEETCIYYWACKAPDGEPDLTFPIGPKFSHLVHECNEEKCLLQLIFYVENHSKPWKPRIKKCGCRVIFKEEWKMFKIGASNQVVPAFAKLKFIDLSYSEDLIQTPIVSGAPCLERLLLMGCINLVEVHPSVGQHKRLVVLFMKNCKNLEIMPRKLEMDALEELILSGCSKVKKLPEFGKSMKSLSLLSVESCTNLLCLPNSICNLKSLRKLNMSGCSRLSTLPDGLNENESLEELDVSGTAIREITLSKVRLEKLKELSLGGQKEQELAPNSQNLPIWISKFMRQPDMKESIVPPLSSLLALVSLDLSYRDLNDESFPSDLGSLSSLQELDLSGNNFVNPPAQCIINLSMLQILSFNDCPTLESLPMLPPNLQGLYANNCPKLKPFNLDEETLWKIFETQSHMDPDCQLSEWWGIAVCLAFEPLINMEEDSSPSYVKPTSTGNFYYWVCKAPDQDPDPMFPIASKFGHLVYKFNDPYIHIIFLTADHVYIQHYLSGEQTQLQLIFFVENRSKSCKATIKKCGCRVICKEKIEEWRKHSDGLITSRFTEMNDDVEFRHEFEVEVPTSPNTSSSMDKTAVNTNLGK 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2261 873 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 7 231 - -
Aed3g2261 873 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 231 IPR044974 GO:0006952
Aed3g2261 873 Gene3D Ribonuclease Inhibitor 2 162 IPR032675 -
Aed3g2261 873 SUPERFAMILY L domain-like 6 139 - -
Aed3g2261 873 SUPERFAMILY RNI-like 376 678 - -
Aed3g2261 873 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 375 463 - -
Aed3g2261 873 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 448 679 - -
Aed3g2261 873 Gene3D Ribonuclease Inhibitor 361 573 IPR032675 -
Aed3g2261 873 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 448 679 IPR044974 GO:0006952
Aed3g2261 873 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 375 463 IPR044974 GO:0006952
Aed3g2261 873 MobiDBLite consensus disorder prediction 853 873 - -
Aed3g2261 873 Gene3D Ribonuclease Inhibitor 574 693 IPR032675 -
Aed3g2261 873 Pfam Leucine Rich repeat 72 86 IPR001611 GO:0005515
Aed3g2261 873 SMART LRR_typ_2 613 636 IPR003591 -
Aed3g2261 873 SMART LRR_typ_2 70 95 IPR003591 -
Aed3g2261 873 SMART LRR_typ_2 494 518 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2261 Aed-Chr3 26015489 26021596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2261 375 547 WRKY Transcription Factor Family AT4G12020 36.269 1.16e-19 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2261 - - gmx:100799850 838.95