Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2251 ATGCAACAAGTGGCGGCAGAACTCCAACACACCCATCGCCACCAGAGGCAACATGACACCACCGCCATGTGCCGCCAAATCCAGCTCACTATCTCCGATCACACCACCGCCGTAGACGACGGCGAGGATCTCTTCATTCCGCCCCTCAACTTCTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGAACCCGCCAACTTCTCCTTCCTCCATACCCTTGGCCTCCGTTCTATCATATATCTGTGTCCTGAGCCGTATCCGGAGGCCAACATGGAGTTTCTCAAGTCAAATGGGATCAAGCTTTATCACTTTGGAATTGAGGGTCATAAGGAGCCTTTCGTGAACATTCCAGACGACACAATCCGTGAAGCACTAAAAGTTGTCCTTGATGTCAGGAATCACCCAGTTATAATTCACTGTAAGCGGGGAAAGCACCGAACGGGTTGCTTAGTAGGATGCTATAGAAAATTGCAAAAATGGTGCTTGTCATCTGTGTTTGATGAATACCAACGGTTTGCAGCAGCCAAAGCAAGAGTTTCAGATCAGAGGTTTGTAGAGTTGTTTGATATTTCCAGCCTGAAACATTTGCCCATACCCTTTTCATATTTGAAGAAGTAA 624 0.4792 MQQVAAELQHTHRHQRQHDTTAMCRQIQLTISDHTTAVDDGEDLFIPPLNFSMVDNGIFRSGFPEPANFSFLHTLGLRSIIYLCPEPYPEANMEFLKSNGIKLYHFGIEGHKEPFVNIPDDTIREALKVVLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSLKHLPIPFSYLKK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2251 207 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 205 - -
Aed3g2251 207 ProSiteProfiles Dual specificity protein phosphatase domain profile. 50 204 IPR020422 GO:0006470|GO:0008138
Aed3g2251 207 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 192 IPR029021 -
Aed3g2251 207 CDD PFA-DSP_Siw14 44 191 - -
Aed3g2251 207 ProSitePatterns Tyrosine specific protein phosphatases active site. 140 150 IPR016130 GO:0016311|GO:0016791
Aed3g2251 207 Pfam Tyrosine phosphatase family 46 197 IPR004861 -
Aed3g2251 207 Gene3D Protein tyrosine phosphatase superfamily 44 194 IPR029021 -
Aed3g2251 207 PRINTS Plant and fungal dual specificity phosphatase signature 82 95 IPR020428 GO:0016791
Aed3g2251 207 PRINTS Plant and fungal dual specificity phosphatase signature 101 115 IPR020428 GO:0016791
Aed3g2251 207 PRINTS Plant and fungal dual specificity phosphatase signature 118 132 IPR020428 GO:0016791
Aed3g2251 207 PRINTS Plant and fungal dual specificity phosphatase signature 45 62 IPR020428 GO:0016791
Aed3g2251 207 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 12 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2251 Aed-Chr3 25939526 25943449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2251 32 207 Protein tyrosine phosphatase (PTP) family AT4G03960 72.159 1.00e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2251 K18045 - gmx:100799968 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2251 3 25939526 25943449 Aed3g2251 3 25939526 25943449 ECH