Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2240 ATGAGTTGTCTCTCATGGCTATTATTATTATTGTTGTTGGTGGCTACTACAATATCGGAGGCCAAAAATAATATCCCAGCCGTGATTGTTTTCGGAGACTCCTCTGTGGACTCTGGGAACAACAACGCGATAGCCACTGTTCTGAAGAGCAACTTTAAGCCTTATGGTCGTGACTTCGAAGGTGGTCGTCCCACGGGACGGTTCTCCAATGGTCGTGTCCCTCCAGATTTCATTGCTGAAGCTTTTGGCATTAAAAACGCGATTCCCGCATACTTGGATCCTGCCTATACCATTCAGGATTTCGCCACTGGGGTTTGCTTTGCTTCTGCTGGCACTGGATATGATAATGCAACTTCTTCCGTACTAAACGTAATACCACTGTGGAAGGAATTAGAGTATTACAAGGAGTATCAAGCCAAACTGAGAGCCCACGTTGGCGTAGAAAAGGCCAACGAGATCATAAGCGAAGCGTTGTACTTGATGAGCTTAGGAACCAATGATTTCCTCGAAAACTATTACATTTTCCCAACACGAAGACTCCACTTCACCGTGTCACAATATCAGGATTTTCTATTGCACATTGCGGAGAGTTTCGTTAGGGAATTGTACGCACTTGGAGCAAGGAAATGGTCCATAACTGGTCTTGTTCCCGTAGGTTGTCTCCCATTAGAGAGGGCCACGAACATCTTCGGCGACCATGGTTGCAACGAGGAATACAACAACGTGGCTTTGGGCTTCAATAGGAAGTTGGAGAATGTGATAAATAAGCTTAATAAGGAGCTACCACAGTTGAAAGCGTTGTCGGCAAATGCATACTCCATCGTCTATGATATCATTACAAAACCTTCCACTTATGGATTTGAGGTTGTAGAGAAGGCATGTTGTTCGACAGGAACATTTGAGATGAGCTACATGTGCAGTGACAAGAATCCACTTACATGCTCAGACGCTGACAAGTATGTGTTTTGGGACGCCTTTCATCCTACGGAGAAGACAAATCGCATTGTCTCAAGTTATTTGATTCCAAAGCTTCTAGCAACCTTTAGATAG 1050 0.4438 MSCLSWLLLLLLLVATTISEAKNNIPAVIVFGDSSVDSGNNNAIATVLKSNFKPYGRDFEGGRPTGRFSNGRVPPDFIAEAFGIKNAIPAYLDPAYTIQDFATGVCFASAGTGYDNATSSVLNVIPLWKELEYYKEYQAKLRAHVGVEKANEIISEALYLMSLGTNDFLENYYIFPTRRLHFTVSQYQDFLLHIAESFVRELYALGARKWSITGLVPVGCLPLERATNIFGDHGCNEEYNNVALGFNRKLENVINKLNKELPQLKALSANAYSIVYDIITKPSTYGFEVVEKACCSTGTFEMSYMCSDKNPLTCSDADKYVFWDAFHPTEKTNRIVSSYLIPKLLATFR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2240 349 CDD SGNH_plant_lipase_like 26 343 IPR035669 -
Aed3g2240 349 Gene3D SGNH hydrolase 15 346 IPR036514 -
Aed3g2240 349 SUPERFAMILY SGNH hydrolase 28 344 - -
Aed3g2240 349 PANTHER GDSL ESTERASE/LIPASE EXL3 9 348 - -
Aed3g2240 349 Coils Coil 247 267 - -
Aed3g2240 349 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 348 - -
Aed3g2240 349 Pfam GDSL-like Lipase/Acylhydrolase 28 340 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2240 Aed-Chr3 25831467 25835943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2240 3 341 Pollen Coat Proteome AT1G75910 37.283 3.69e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2240 - - gmx:100809260 637.106