Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2218 ATGGCTTCGTTGTTTTGTTCTAGCTTTATGATCCTTTTGGTCCTCGTGTTGGGGACTACTACTAGTGCCAATGCCAATCCAACACTTCACACAAACTTCTACTACAGTTCTTGCCCAAAACTCTTTGACACTGTGAAACGCACTGTGGAATCGGCCATATCAAAGGAGACCCGCATGGGTGCTTCTCTCCTACGTTTGTTCTTCCACGATTGCTTTGTTAATGGGTGTGATGGGTCAATTTTACTTGATGACACATCAAGCTTTACCGGAGAGAAGAACGCGGGTCCTAACAGGAACTCAGCCCGTGGATTCGAAGTAATCGACAAAATCAAATCAGCTGTGGAGAAAGTGTGTCCGGGTGTTGTCTCCTGTGCTGACATCCTTGCCATTGCTGCTAAAGACTCTGTTCACATCCTTGGAGGCCCAAGTTGGGATGTGAAACTTGGAAGAAGAGACTCGAGGAGCGCAAGCCAATCTGCTGCCAACAACGACATCCCACGACCCACTTCTAACCTTAACCAACTCATTTCCAGGTTCAATGCTCTCGGACTTTCTACCAAGGACTTGGTCGCACTATCTGGTACAGGTATAACTGCCAGCTAA 603 0.4726 MASLFCSSFMILLVLVLGTTTSANANPTLHTNFYYSSCPKLFDTVKRTVESAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNAGPNRNSARGFEVIDKIKSAVEKVCPGVVSCADILAIAAKDSVHILGGPSWDVKLGRRDSRSASQSAANNDIPRPTSNLNQLISRFNALGLSTKDLVALSGTGITAS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2218 200 PANTHER PEROXIDASE 13 195 - -
Aed3g2218 200 Gene3D - 32 165 - -
Aed3g2218 200 ProSiteProfiles Plant heme peroxidase family profile. 28 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Aed3g2218 200 Pfam Peroxidase 45 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PANTHER PEROXIDASE 72-RELATED 13 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PRINTS Haem peroxidase superfamily signature 188 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 SUPERFAMILY Heme-dependent peroxidases 29 194 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed3g2218 200 Gene3D Peroxidase, domain 2 166 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2218 Aed-Chr3 25656571 25658493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2218 29 194 Peroxidase AT5G05340 76.506 2.57e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2218 K00430 - gmx:100791414 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2218 3 25656571 25658493 Aed3g2218 3 25656571 25658493 ECH