Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2212 ATGGGTGTGGCTACGCAGATTTCATTAACAATATGCGTAGCAATCTACTTTGCTATTGGCTTTTCTGGGTACCTTTTGTTTGGGGATTCCATCATGCCTGACGTGCTGCACAGGGACATGCATGGCATATCAAAGACCAAAGATCAAGTCATGGCAATAGTGGTGATTGTTTTGGCCATAGGGACAAGCGGAATTACTATATGGACCAACTTGAATGGTTCAGGGGCTGATAAGTAA 237 0.4388 MGVATQISLTICVAIYFAIGFSGYLLFGDSIMPDVLHRDMHGISKTKDQVMAIVVIVLAIGTSGITIWTNLNGSGADK 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2212 78 PANTHER AMINO ACID TRANSPORTER 41 76 - -
Aed3g2212 78 PANTHER AMINO ACID TRANSPORTER 1 36 - -
Aed3g2212 78 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 41 76 - -
Aed3g2212 78 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2212 Aed-Chr3 25618037 25618802 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2212 4 36 Amino Acid or Auxin Permease AAAP Family AT3G56200 63.636 1.92e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2212 - - gmx:100794031 78.1814