Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2183 ATGACCAAGAACAGGAAACTTAGTCAGTTCAAGGATCTTTCTACAGCTTTTCGCTTTGTGGTGGTTTTTTTATTGTTTCAGAACTTGGGTTTGTGCTGTTCTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTGAGGCAGAGAATAATGAGTGACCCTTTTGGTGCTTTGTCAAATTGGGTTGATGATGAAGTATCTCTTGACCCTTGTAATTGGTTTGGAGTTGAGTGCTCAGATGGAAGAAAAGTTGTGGTCTTGAATTTGAAGGATCTCTGCCTTGGAGGAACTCTGGCGCCTGAGCTTGTGAAGCTTGTCAACATAAAGTCTATTATTTTGCGGAACAACTCTTTCTCTGGGACGATCACTGAGGGATTTGTAGATTTAAAAGAATTAGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGAAATCTACCTGTTGATCTTGGGAGTAATATCTCACTAGCAATCCTTTTGCTGGACAACAATGAGTTTCTTGTTGGTTTATCTCCCGAAATAAATGAACTGAGGATGCTTTCTGAATGTCAAGTAGATGAAAATCAGCTAACTAATGCTGCTAAAATGCCAGCTTGTACAGAAAGAGCCACCACATGGCATATTGGTGAAGGTAAAGGTACTCGTGGCCTTCTAGCACTGCCTCCAATTACTCGTACTCGTCATGAACCTTTCTATCGTGGTCATCAGAGCCCTTCTCCTTCTGCTTCTCCATCAGCCTCAGCAAAACCACCAGTGCCAAAGCTAGCTTCTCCTCCTCCCCCCTCTCCATCAGTTTCTAGAACACTATTTAAAACTAAAAGCTCCTCTTCAAAGATTCGTCTTATTATGGCTGGAATTATAGGTGGTGCTGTGTTTCTTATTTTTTCAAGCATTGGCATATATCTTTGTAAGACAAAGGTAGCTAATGTCAGACCTTGGGTTACGGGACTAAGTGGACAGCTTCAGAAGGCATTTGTAACTGGTGCCCAAAAGCTTAAGAGATCAGATCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCACCCGTTGGTACACTGTACAAAGGAACTTTGTCTAGTGGCGTTGAAATAGCTGTAGCTTTGGTTCTGGTAAAAGAATCCAAGAGTTGGTCAAAGACTTTAGAGGCTCAGTTTAGAAGCAAGATAGATACATTGTCGAAAGTCAACCACAAGAATTTTGTCAATCTTATTGGATACTGTGAAGAAGAGGAGCCTTTCACCAGAATGTTGTTGGACCCTCCTATGACCCTTATCAAGCTGAATTCTTCAGCTGTTTACCTCACTGATGACTATGCAGCCAAACTCTCAGATTTGAGTTTCTCAAATGACATAGCCTCAGATGAGACAACAACAAGAGCTATTGACATGCCAACAGCAACTCCAGAAAGCAATGTTTATAACTTTGGTGTTTTACTATTTGAAATGATCACTGGTCGTATCCCTTATTCAGTGGAACAAAGGGACTCACTTGAAAACTGGGCATCACACTATTTAGAAGGGGACCAACCCCTCAAAGAAATTGTGGATCCAATTATAGTGTCTTACCAAGAAGATCAACTTGAACAAGTTGCTGCATTGATTACTTCTTGTGTCCACCCTGATCCACAGCAGAGACCAACAATGAAAGATGTGAGCGAGAGACTGAGAGAGATAACAAAAATAACACCTGAATCAGCAATTCCAAAACTTTCTCCACTTTGGTGGGCAGAACTTGAGATTGCTTCTGCAGAAGCACGTTGA 1767 0.4097 MTKNRKLSQFKDLSTAFRFVVVFLLFQNLGLCCSLNEEGNALLKLRQRIMSDPFGALSNWVDDEVSLDPCNWFGVECSDGRKVVVLNLKDLCLGGTLAPELVKLVNIKSIILRNNSFSGTITEGFVDLKELEVLDLGYNNFSGNLPVDLGSNISLAILLLDNNEFLVGLSPEINELRMLSECQVDENQLTNAAKMPACTERATTWHIGEGKGTRGLLALPPITRTRHEPFYRGHQSPSPSASPSASAKPPVPKLASPPPPSPSVSRTLFKTKSSSSKIRLIMAGIIGGAVFLIFSSIGIYLCKTKVANVRPWVTGLSGQLQKAFVTGAQKLKRSDLEAACEDFSNVIGTSPVGTLYKGTLSSGVEIAVALVLVKESKSWSKTLEAQFRSKIDTLSKVNHKNFVNLIGYCEEEEPFTRMLLDPPMTLIKLNSSAVYLTDDYAAKLSDLSFSNDIASDETTTRAIDMPTATPESNVYNFGVLLFEMITGRIPYSVEQRDSLENWASHYLEGDQPLKEIVDPIIVSYQEDQLEQVAALITSCVHPDPQQRPTMKDVSERLREITKITPESAIPKLSPLWWAELEIASAEAR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2183 588 MobiDBLite consensus disorder prediction 228 268 - -
Aed3g2183 588 Gene3D Transferase(Phosphotransferase) domain 1 421 569 - -
Aed3g2183 588 SUPERFAMILY L domain-like 41 192 - -
Aed3g2183 588 PANTHER LRR RECEPTOR-LIKE KINASE 420 585 - -
Aed3g2183 588 PANTHER LRR RECEPTOR-LIKE KINASE 1 419 - -
Aed3g2183 588 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Aed3g2183 588 Pfam Protein tyrosine and serine/threonine kinase 464 557 IPR001245 GO:0004672|GO:0006468
Aed3g2183 588 Pfam Protein tyrosine and serine/threonine kinase 344 415 IPR001245 GO:0004672|GO:0006468
Aed3g2183 588 SUPERFAMILY Protein kinase-like (PK-like) 335 576 IPR011009 -
Aed3g2183 588 MobiDBLite consensus disorder prediction 243 264 - -
Aed3g2183 588 Gene3D Ribonuclease Inhibitor 33 205 IPR032675 -
Aed3g2183 588 Gene3D Phosphorylase Kinase; domain 1 315 420 - -
Aed3g2183 588 PANTHER PROTEIN MALE DISCOVERER 2 420 585 - -
Aed3g2183 588 PANTHER PROTEIN MALE DISCOVERER 2 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2183 Aed-Chr3 25471402 25475308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2183 34 557 Receptor kinase-like Gene Family AT5G16000 24.660 2.57e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aed3g2183 PK_Tyr_Ser-Thr 5.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2183 - - gmx:100820416 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2183 3 25471402 25475308 Aed3g2183 3 25471402 25475308 ECH
Aed7g2028 7 23058583 23062525 Aed3g2183 3 25471402 25475308 PCT