Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2177 ATGGGAAGTTCCATGCGTGTAAAAGAAGCATCAGTGATTACACCTTCTGAGCCCACTCCCTCGAGTGTGTTGGCTCTATCAGCTCTTGATTCGCAACTCTTCCTACGCTTCACAATAGAGTATCTCTTTGTCTACAACCCTTGCCCTGACATGGACCAGCCTGCCACCACGGCCCGTTTAAAAGCAGCATTAGCCCGAGCGCTGGTTCCATATTACCCCTTCGCGGGCCGTGTCAGGCCCAGACCCGACGGTCCGGGCCTGGAGGTTGTGTGCGGAGCCCAAGGCGCAGTGTTCATAGAAGCCTCCGCTGACCGTTACAATGTTAACGACTTCCAGAAAGCGCCTAAAACAGTTACGCACTGGAGGTCGCTACTGTCGCTCCACGTGGCAGATGTTCTCAAAGGATCGCCGTCGCTGGTGGTTCAGCTGACGTGGCTCGCCGACGGAGCCGCTGCAATCGGCGTCGGGATCAACCACTGTATCTGCGACGGGATCGGAAGCGCGGAGTTTCTAAACTACTTCGCCGAGTTAACCAGAGAAAAACGCGAGTCAGCTCACAGGCCGAAACACAAACCTGTGTGGGAGCGTCACCTTCTTCACCCGACGCGTGGGAAGCAGACGCGGGTTGAGTCGGCGAGTCACCCCGAGTTCAACCGAGTCCCGGATTTATGCAACTTCATGAACAAGGTCTCGACGGGGCTTAAGCCAACCTCGGTGACCTTCGACAAGAGGAGACTGAACGAGCTGAAGCGACTCGCTCGTTGCACGAGTGAACCCGGCGAGTCGTTGGGGTACACGTCGTTCGAGGTGCTGGCTGCGCACGTGTGGAGAAGCTGGGCTAGAGCGATAGGGTTTCCGGCGAACCAGAAGTTGAAGCTGGTGTTTAGTGTAAACGTGAGGAACCGCGTTAAGCCGGGTCTGGCGGAGGGCTATTATGGGAATGCGTTTGTGTTGGGGTGCGCGGAGGCGAGTGCGAAGGAGGTGGAGGAGAAAGGGATCGGGTTCGGGTCGGGTTTGGTGAAGAGAGCGAAGGAGAGAGTGGGGAACGAGCACGTGAGGGGGGTGATGGAGTTGGTGTGGGAGAAGAAAGCCTGCCCAGACCCAGTTGGGGTGCTGATAGTGTCGCAGTGGTCTCGGTTGGGGTTGGGTTTGGAGAAGGTTGACGTGGGTATGGGGAAGCCTGTTCACGTGGGACCCGTGTGCTGCGATAGGTACTGTTTGTTTTTGCCGGTCACTGATGAGGAGAGTAGTGTGAGTGTCAAGGTCATGGTGGCTGTCCCCACTCACGCCGTTGACAATTACGATCTTTTCATGCGCGCCTCGTCTCACCTGTGA 1335 0.5693 MGSSMRVKEASVITPSEPTPSSVLALSALDSQLFLRFTIEYLFVYNPCPDMDQPATTARLKAALARALVPYYPFAGRVRPRPDGPGLEVVCGAQGAVFIEASADRYNVNDFQKAPKTVTHWRSLLSLHVADVLKGSPSLVVQLTWLADGAAAIGVGINHCICDGIGSAEFLNYFAELTREKRESAHRPKHKPVWERHLLHPTRGKQTRVESASHPEFNRVPDLCNFMNKVSTGLKPTSVTFDKRRLNELKRLARCTSEPGESLGYTSFEVLAAHVWRSWARAIGFPANQKLKLVFSVNVRNRVKPGLAEGYYGNAFVLGCAEASAKEVEEKGIGFGSGLVKRAKERVGNEHVRGVMELVWEKKACPDPVGVLIVSQWSRLGLGLEKVDVGMGKPVHVGPVCCDRYCLFLPVTDEESSVSVKVMVAVPTHAVDNYDLFMRASSHL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2177 444 Gene3D - 228 436 IPR023213 -
Aed3g2177 444 Gene3D - 3 218 IPR023213 -
Aed3g2177 444 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 437 - -
Aed3g2177 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 437 - -
Aed3g2177 444 Pfam Transferase family 7 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2177 Aed-Chr3 25430311 25431645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2177 5 422 Monolignol Biosynthesis Gene Families AT5G48930 25.806 1.58e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2177 - - gmx:100817048 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2177 3 25430311 25431645 Aed3g2177 3 25430311 25431645 ECH
Aed7g2033 7 23101580 23102866 Aed3g2177 3 25430311 25431645 PCT